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Fix ROI Editor margin and plane number #622

Merged
merged 8 commits into from
Feb 23, 2024
Merged

Fix ROI Editor margin and plane number #622

merged 8 commits into from
Feb 23, 2024

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yoda-vid
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@yoda-vid yoda-vid commented Feb 23, 2024

The plane numbers were inadvertently lost and margin dimensions flipped in the zoomed ROI plots, fixed here. Also many small docs updates.

Commit b754375 introduced a regression where the plane number is no longer shown for the zoomed ROI plots since showing the Plot Editor clears the axes. Fix by adding the title after showing this Plot Editor.
Describe adding different layers of 3D objects.
Commit e51d6dd introduced a regression where the ROI offset and size but not the margin array orders were reversed when flagged. Fix here along with fixes for the ordering in the docstring.
Commit 2565df7 introduced a regression where the CLI table does not render properly in GitHub-flavored markdown. Simply remove this fixed width for now.
- Move Pip command into separate code block
- Add change directory command
- Add sample commands Notebook format to quick reference
- Simplify instructions for starting a new Conda environment
- Clarify the `most` install group includes registration tools
@yoda-vid yoda-vid added bug Something isn't working documentation Improvements or additions to documentation labels Feb 23, 2024
@yoda-vid yoda-vid added this to the v1.6.0 milestone Feb 23, 2024
@yoda-vid yoda-vid merged commit bb120c3 into master Feb 23, 2024
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@yoda-vid yoda-vid deleted the blobs_from_region branch March 12, 2024 20:41
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