Add ctg_cov to cluster column presets

sanger-pathogens · Mar 29, 2017 · 15a88c8 · 15a88c8
1 parent cfe0428
commit 15a88c8
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/ariba/tasks/summary.py b/ariba/tasks/summary.py
@@ -18,22 +18,22 @@ def use_preset(options):
             'row_filter': 'y',
         },
         'cluster_all': {
-            'cluster_cols': 'assembled,match,ref_seq,pct_id,known_var,novel_var',
+            'cluster_cols': 'assembled,match,ref_seq,pct_id,ctg_cov,known_var,novel_var',
             'col_filter': 'y',
             'row_filter': 'y',
         },
         'cluster_var_groups': {
-            'cluster_cols': 'assembled,match,ref_seq,pct_id,known_var,novel_var',
+            'cluster_cols': 'assembled,match,ref_seq,pct_id,ctg_cov,known_var,novel_var',
             'col_filter': 'y',
             'row_filter': 'y',
         },
         'all': {
-            'cluster_cols': 'assembled,match,ref_seq,pct_id,known_var,novel_var',
+            'cluster_cols': 'assembled,match,ref_seq,pct_id,ctg_cov,known_var,novel_var',
             'col_filter': 'y',
             'row_filter': 'y',
         },
         'all_no_filter': {
-            'cluster_cols': 'assembled,match,ref_seq,pct_id,known_var,novel_var',
+            'cluster_cols': 'assembled,match,ref_seq,pct_id,ctg_cov,known_var,novel_var',
             'col_filter': 'n',
             'row_filter': 'n',
         },