Code

Rename clusters#110

Code

Merged

martinghunt merged 10 commits intosanger-pathogens:mastersanger-pathogens/ariba:masterfrom martinghunt:rename_clustersmartinghunt/ariba:rename_clustersCopy head branch name to clipboardJul 28, 2016

+119-25

Commits

Commits on Jul 28, 2016

• New method _rename_clusters

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  f648845

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• Rename clusters

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  e0c857a

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• Fix description of clusters file

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  048cca3

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• Min prefix length 3

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  fc86f4c

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• Use -A option with fermi-lite

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  32bd92d

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• Move cpp files to separate directory

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  01c9fe4

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• Rename minimap dir to minimap-0.2

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  5b81826

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• Cluster names are strings, not ints

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  d59e34d

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• Use underscores instead of dashes

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  6995ab6

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• Use - and + instead of * and !

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  fe6fce5

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