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Update docker image to Ubuntu 17.10 and Ariba v.2.12.0 #227

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May 31, 2018
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Update docker image to Ubuntu 17.10 and Ariba v.2.12.0 #227

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4 changes: 2 additions & 2 deletions Dockerfile
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM ubuntu:17.04
FROM ubuntu:17.10

RUN apt-get update
RUN apt-get install --no-install-recommends -y \
Expand Down Expand Up @@ -29,7 +29,7 @@ ENV ARIBA_BOWTIE2=$PWD/bowtie2-2.2.9/bowtie2 ARIBA_CDHIT=cdhit-est MPLBACKEND="a

RUN git clone https://github.com/sanger-pathogens/ariba.git \
&& cd ariba \
&& git checkout v2.10.1 \
&& git checkout v2.12.0 \
&& python3 setup.py test \
&& python3 setup.py install

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