Improvements to summary output; new flag for non-synonymous variants #36
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martinghunt
commented
Oct 27, 2015
martinghunt
commented
- New flag 'has_nonsynonymous_variants', so user can easily tell if variants are really change or not
- Extra summary number in summary output, to disinguish between genes that have non-synonymous variants and those that do not
- Option to have summary output all information instead of default, which removes rows or columns where all values are zero (ie gene not there)
- Update dependency versions (which removes numpy as a dependency), and ariba version
added 6 commits
October 27, 2015 13:48
bewt85
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Oct 28, 2015
Improvements to summary output; new flag for non-synonymous variants
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