Code

Implement multithreading#38

Code

Merged

andrewjpage merged 6 commits intosanger-pathogens:mastersanger-pathogens/ariba:masterfrom martinghunt:multithreadingmartinghunt/ariba:multithreadingCopy head branch name to clipboardDec 3, 2015

+93-51

Commits

Commits on Dec 2, 2015

• Run each cluster in parallel

  

  Martin Hunt

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  e525d8f

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• Write a log file for each cluster

  

  Martin Hunt

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  ffcef66

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Commits on Dec 3, 2015

• Tidy up reporting

  

  Martin Hunt

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  0caa821

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• flush stdout so output is in the right order

  

  Martin Hunt

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  b191b3c

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• Make printing errors optional

  

  Martin Hunt

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  a8254da

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• More useful output when spades fails, and do not spam stderr

  

  Martin Hunt

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  c1bd906

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