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Rename sequences #66

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merged 8 commits into from
Apr 27, 2016
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martinghunt
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This makes prepareref rename sequences that have non-word characters in them, and check for resulting uniqueness etc. Stops breaking on CARD data, which has things like quotes in the names.

@martinghunt martinghunt merged commit 3edf1cc into sanger-pathogens:master Apr 27, 2016
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