Code

Tmp dir option#79

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martinghunt merged 10 commits intosanger-pathogens:mastersanger-pathogens/ariba:masterfrom martinghunt:tmp_dir_optionmartinghunt/ariba:tmp_dir_optionCopy head branch name to clipboardMay 7, 2016

+167-47

Commits

Commits on May 6, 2016

• Bux fix, delete files when not verbose

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  b5bb1a5

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• Add tmp_dir option

  martinghunt

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  8302c17

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• Delete temp directory if ctrl-c used

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  1ceaaf4

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• Keep tmp dir if not cleaning

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  bc01103

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• Only cat files that exist

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  b4e56ac

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• Catch signals and delete tmp directory before exiting

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  730e7ed

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• chdir to cluster dir so temp files written in there

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  88e926b

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• remove fails_dir

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  4848dfd

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• Use ARIBA_TMPDIR if exists

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  02e7e0f

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• more robust signal handling. tmp_Dir should always get deleted

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  7ce6747

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