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39 Open 352 Closed
39 Open 352 Closed
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Issues list

Barcodes - "Warning! None of the annotated barcodes were detected."
#409 opened Feb 12, 2025 by EvlampiaPar
zUMI parallel::mclapply AND 'strsplit': object 'GE' not found errors
#408 opened Feb 11, 2025 by vishaa5
1
Can zUMIs be used for Smart-Seq3 on only one sample
#407 opened Jan 19, 2025 by realzhang
Syntax error loading yaml file
#406 opened Dec 25, 2024 by iwanttoeatyo
BUG: split cannot open path error
#404 opened Oct 7, 2024 by YinCY123
1
One or more of your executables were not found. Please check back.
#403 opened Sep 30, 2024 by Johnny3333
/genomeParameters.txt: No such file or directory
#402 opened Aug 29, 2024 by lysurgeon
Can zUMIs be used for DNA-seq data alignment?
#401 opened Aug 29, 2024 by zhober
zUMIs on cDNA with varied length
#400 opened Aug 20, 2024 by HaikuoLi
Problem with STAR version
#397 opened Jul 10, 2024 by joannaslotaczarny
Calculating TPM or FPKM
#395 opened May 7, 2024 by gevro
BUG
#394 opened Apr 19, 2024 by nhu-github
1
R error during counting step before demultiplexing.
#393 opened Apr 16, 2024 by dfmoralesb
1
Error in using zumis to analyse transposon
#392 opened Apr 6, 2024 by ROund-code
error in using zUMIs to processing smartseq3 data
#391 opened Feb 23, 2024 by GGboy-Zzz
Cannot get the example data from Google Drive
#390 opened Feb 21, 2024 by RoseMary93
1
Question：How zUMIs detect Barcodes and why the sum of second column in BCstat.txt is not equal to the sum of input reads number？
#389 opened Feb 5, 2024 by bioinfotec
Error with Corrrecting UB tags when working with large sample size
#388 opened Jan 28, 2024 by kvn95ss
The .git/objects/pack file is so huge
#386 opened Jan 16, 2024 by bioinfotec
1
Issues while starting zUMIs
#383 opened Dec 13, 2023 by Thomas-Michiels
1
Question about put pattern and internal reads together to analyse
#382 opened Dec 4, 2023 by Dkaaaaa
3
Question - about the result of kept_barcodes_binned.txt.BCUMIstats.txt
#381 opened Nov 20, 2023 by Dkaaaaa
3
Using demultiplexed BAM files output from zUMIs with Picard Tools
#380 opened Nov 9, 2023 by seifudd
1
Failed to open filtered.tagged.unmapped.bam
#379 opened Oct 30, 2023 by aduntslusine
1
Mapping error at .tmpMap//tmp.test2.*.SJ.out.tab'
#378 opened Oct 26, 2023 by aliibarry
5
ProTip! no:milestone will show everything without a milestone.