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Added ICD10 description tiers #12
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-- A collection of convenience views for UMLS data | ||
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-- Selecting only child relationships FROM mrrel | ||
CREATE TABLE IF NOT EXISTS umls__mrrel_is_a AS |
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This umls__mrrel_is_a
only applies to DRUGS, recommend changing name to
umls__mrrel_drug_is_a
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ok, done
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From reading "Files Changed" looks good, only change recommended is the name for the umls MRREL "is a" ... that's only for drugs wouldn't want users to be confused.
Looks good very minor requested name change. |
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@@ -44,7 +44,8 @@ testpaths = [ | |||
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[tool.ruff] | |||
target-version = "py310" | |||
target-version = "py311" | |||
line-length = 100 |
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You were feeling like 100 was too much for your tastes, after living with it for a bit, yeah? I'm fine if you want to keep the default going.
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Yeah it's fine - mostly I'm here for 'just do it this one way and don't spend time debating it'.
This PR aims to add some utility views into the data around ICD coding, by doing the following:
It also updates the UMLS study to be compatible with library v4, and writes the version of UMLS data used to the transaction log.