use pyproject.toml

.github/workflows/publish-quarto.yml

@@ -1,46 +1,39 @@
-name: Quarto Publish
-
-on: [push]
-
-jobs:
-  build-deploy:
-    runs-on: ubuntu-latest
-    permissions:
-      contents: write
-    steps:
-      - name: Check out repository
-        uses: actions/checkout@v4
-
-      - name: Install system dependencies
-        run : |
-          sudo apt-get update
-          sudo apt-get upgrade
-          sudo apt-get install libudunits2-dev libgdal-dev libcurl4-openssl-dev
-
-      - name: Set up python
-        id: setup-python
-        uses: actions/setup-python@v5
-        with:
-          python-version: '3.11'
-
-      - name: Install Poetry
-        uses: snok/install-poetry@v1
-        with:
-          virtualenvs-create: true
-          virtualenvs-in-project: true
-          installer-parallel: true
-
-      - name: Install the project
-        if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
-        run: |
-          poetry install --no-interaction --no-root
-        
-      - name: Set up Quarto
-        uses: quarto-dev/quarto-actions/setup@v2
-
-      - name: Render and Publish
-        uses: quarto-dev/quarto-actions/publish@v2
-        with:
-          target: gh-pages
-        env:
+name: Quarto Publish
+
+on: [push]
+
+jobs:
+  build-deploy:
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+    steps:
+      - name: Check out repository
+        uses: actions/checkout@v4
+
+      - name: Install system dependencies
+        run : |
+          sudo apt-get update
+          sudo apt-get upgrade
+          sudo apt-get install libudunits2-dev libgdal-dev libcurl4-openssl-dev
+
+      - name: Set up python
+        id: setup-python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.11'
+
+      - name: Install dependencies
+        run: |
+          pip install --upgrade pip
+          pip install -r <(python -c 'import toml; print("\n".join(toml.load("pyproject.toml")["project"]["dependencies"]))')
+
+      - name: Set up Quarto
+        uses: quarto-dev/quarto-actions/setup@v2
+
+      - name: Render and Publish
+        uses: quarto-dev/quarto-actions/publish@v2
+        with:
+          target: gh-pages
+        env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/tests.yml

@@ -1,59 +1,42 @@
-name: Pytest
-
-on: [push]
-
-jobs:
-  build:
-
-    runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        python-version: [3.9, '3.10', 3.11, 3.12]
-
-    steps:
-    - name: Check out repository
-      uses: actions/checkout@v4
-
-    - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v5
-      with:
-        python-version: ${{ matrix.python-version }}
-
-    - name: Install system dependencies
-      run: |
-        sudo apt-get update -y
-        sudo apt-get install gdal-bin libproj-dev libgdal-dev proj-bin
-
-    - name: Install Poetry
-      uses: snok/install-poetry@v1
-      with:
-        virtualenvs-create: true
-        virtualenvs-in-project: true
-        installer-parallel: true
-
-    - name: Install package dependencies
-      if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
-      run: poetry install --no-interaction --no-root
-
-    - name: Install library
-      run: poetry install --no-interaction
-
-    # - name: Lint with flake8
-    #   run: |
-    #     source .venv/bin/activate        
-    #     # stop the build if there are Python syntax errors or undefined names
-    #     flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
-    #     # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
-    #     flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
-
-    - name: Test with pytest
-      run: |
-        poetry run pytest --cov-report=xml --cov=.
-
-    - name: "Upload Report to Codecov"
-      uses: codecov/[email protected]
-      env:
-        CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
-      with:
-        file: ./coverage.xml
+name: Pytest
+
+on: [push]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: [3.9, '3.10', 3.11, 3.12]
+
+    steps:
+    - name: Check out repository
+      uses: actions/checkout@v4
+
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ matrix.python-version }}
+
+    - name: Install system dependencies
+      run: |
+        sudo apt-get update -y
+        sudo apt-get install gdal-bin libproj-dev libgdal-dev proj-bin
+
+    - name: Install dependencies
+      run: |
+        pip install --upgrade pip
+        pip install -r <(python -c 'import toml; print("\n".join(toml.load("pyproject.toml")["project"]["dependencies"]))')
+
+    - name: Test with pytest
+      run: |
+        poetry run pytest --cov-report=xml --cov=.
+
+    - name: "Upload Report to Codecov"
+      uses: codecov/[email protected]
+      env:
+        CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
+      with:
+        file: ./coverage.xml
         fail_ci_if_error: true

.gitignore

@@ -1,15 +1,16 @@
-.DS_Store
-.eggs/
-.idea/
-.vscode/
-.pytest_cache/
-*__pycache__/
-build/
-*egg*
-*whl
-*.tar.gz
-**/*.ipynb_checkpoints/
-
-/.quarto/
-_site/
-site/
+.DS_Store
+.eggs/
+.idea/
+.vscode/
+.pytest_cache/
+*__pycache__/
+build/
+*egg*
+*whl
+*.tar.gz
+**/*.ipynb_checkpoints/
+.conda/
+
+/.quarto/
+_site/
+site/

.pre-commit-config.yaml

@@ -1,16 +1,16 @@
-repos:
--   repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v3.2.0
-    hooks:
-    -   id: trailing-whitespace
-    -   id: end-of-file-fixer
-    -   id: check-yaml
-    -   id: check-added-large-files
-    -   id: double-quote-string-fixer
-
--   repo: https://github.com/psf/black-pre-commit-mirror
-    rev: 24.4.2
-    hooks:
-    - id: black
-      name: black (python)
-      language_version: python3.11
+repos:
+-   repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v3.2.0
+    hooks:
+    -   id: trailing-whitespace
+    -   id: end-of-file-fixer
+    -   id: check-yaml
+    -   id: check-added-large-files
+    -   id: double-quote-string-fixer
+
+-   repo: https://github.com/psf/black-pre-commit-mirror
+    rev: 24.4.2
+    hooks:
+    - id: black
+      name: black (python)
+      language_version: python3.11

.python-version

@@ -1 +1 @@
-3.11.9
+3.11.9