Rework actions

.conda/condarc.yaml

@@ -1,6 +1,6 @@
 channels:
   - conda-forge
   - nvidia
-  # - https://conda.anaconda.org/sleap/label/dev
+  - https://conda.anaconda.org/sleap/label/dev
   - sleap
   - anaconda

.github/workflows/build_ci.yml

@@ -89,13 +89,13 @@ jobs:
               pip install '$wheel_path'[dev]
           - test_args: pytest --durations=-1 tests/
           - condarc: .conda/condarc.yaml
+          - pyver: 3.7
           # Use special condarc if macos
           - os: "macos-14"
             condarc: .conda_mac/condarc.yaml
             pyver: 3.10
           # Ubuntu specific values
           - os: ubuntu-22.04
-            pyver: 3.7
             # Otherwise core dumped in github actions
             test_args: |
               sudo apt install xvfb libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0
@@ -104,7 +104,6 @@ jobs:
               pytest tests -k 'not exclude_from_linux_pip_test'
           # Windows specific values
           - os: windows-2022
-            pyver: 3.7
             venv_cmd: .\venv\Scripts\activate
 
     steps:

.github/workflows/build_manual.yml

@@ -26,9 +26,11 @@ jobs:
         include:
           # Use this condarc as default
           - condarc: .conda/condarc.yaml
+          - pyver: "3.7"
           # Use special condarc if macos
           - os: "macos-14"
             condarc: .conda_mac/condarc.yaml
+            pyver: "3.9"
     steps:
       # Setup
       - uses: actions/checkout@v2
@@ -40,20 +42,24 @@ jobs:
         with:
           path: ~/conda_pkgs_dir
           key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('environment_build.yml', 'requirements.txt') }}
+
       - name: Setup Miniconda
-        # https://github.com/conda-incubator/setup-miniconda
-        uses: conda-incubator/[email protected]
+        uses: conda-incubator/[email protected]
         with:
-          python-version: 3.7
-          use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
-          environment-file: environment_build.yml
+          miniforge-version: latest
           condarc-file: ${{ matrix.condarc }}
+          environment-file: environment_build.yml
           activate-environment: sleap_ci
+          python-version: ${{ matrix.pyver }}
+          conda-solver: "libmamba"
+          use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
+
       - name: Print environment info
         shell: bash -l {0}
         run: |
           which python
           conda info
+          conda list
 
       # Build pip wheel (Not Windows)
       - name: Build pip wheel (Not Windows)

.github/workflows/ci.yml

@@ -11,37 +11,20 @@ on:
       - "environment_no_cuda.yml"
       - "requirements.txt"
       - "dev_requirements.txt"
-  push:
-    branches:
-      - master
-      - develop
-    paths:
-      - "sleap/**"
-      - "tests/**"
-      - ".github/workflows/ci.yml"
-      - "environment_no_cuda.yml"
-      - "requirements.txt"
-      - "dev_requirements.txt"
+  # push:
+  #   branches:
+  #     - main
+  #     - develop
+  #   paths:
+  #     - "sleap/**"
+  #     - "tests/**"
+  #     - ".github/workflows/ci.yml"
+  #     - "environment_no_cuda.yml"
+  #     - "requirements.txt"
+  #     - "dev_requirements.txt"
 
 jobs:
-  type_check:
-    name: Type Check
-    runs-on: "ubuntu-22.04"
-    steps:
-      - name: Checkout repo
-        uses: actions/checkout@v3
-      - name: Set up Python 3.7
-        uses: actions/setup-python@v4
-        with:
-          python-version: 3.7
-      - name: Install Dependencies
-        run: |
-          pip install mypy
-      - name: Run MyPy
-        # TODO: remove this once all MyPy errors get fixed
-        continue-on-error: true
-        run: |
-          mypy --follow-imports=skip --ignore-missing-imports sleap tests
+  # Lint
   lint:
     name: Lint
     runs-on: "ubuntu-22.04"
@@ -59,6 +42,8 @@ jobs:
       - name: Run Black
         run: |
           black --check sleap tests
+
+  # Tests
   tests:
     name: Tests (${{ matrix.os }})
     runs-on: ${{ matrix.os }}
@@ -80,25 +65,22 @@ jobs:
       - name: Checkout repo
         uses: actions/checkout@v3
 
-      - name: Setup Micromamba
-        # https://github.com/mamba-org/setup-micromamba
-        uses: mamba-org/setup-micromamba@v1
+      - name: Setup Conda
+        uses: conda-incubator/[email protected]
         with:
-          micromamba-version: '1.4.6-0'
+          miniforge-version: latest
+          conda-solver: "libmamba"
           environment-file: ${{ matrix.env_file }}
-          environment-name: sleap_ci
-          init-shell: >-
-            bash
-            powershell
-          post-cleanup: all
+          activate-environment: sleap_ci
+          use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly!
 
       # Print environment info
       - name: Print environment info
         shell: bash -l {0}
         run: |
           which python
-          micromamba info
-          micromamba list
+          conda info
+          conda list
           pip freeze
       
       # Test environment
@@ -109,7 +91,7 @@ jobs:
 
       # Upload coverage
       - name: Upload coverage
-        uses: codecov/codecov-action@v1
+        uses: codecov/codecov-action@v4
         if: matrix.os == 'ubuntu-22.04'
         with:
           token: ${{ secrets.CODECOV_TOKEN }}