fix: hoisting should not override linked components (#6788)

This fixed for when root components are on and the package manager is set to pnpm

e2e/harmony/dependencies/hoisting.e2e.ts

@@ -0,0 +1,36 @@
+import chai, { expect } from 'chai';
+import path from 'path';
+import Helper from '../../../src/e2e-helper/e2e-helper';
+
+chai.use(require('chai-fs'));
+
+describe('pnpm with hoisted node linker, when there is a dependency that has the same name as a workspace component', function () {
+  let helper: Helper;
+  this.timeout(0);
+  before(() => {
+    helper = new Helper();
+    helper.scopeHelper.setNewLocalAndRemoteScopes();
+    helper.extensions.bitJsonc.addKeyValToDependencyResolver('rootComponents', true);
+    helper.extensions.bitJsonc.addKeyValToDependencyResolver('nodeLinker', 'hoisted');
+    helper.fixtures.populateComponents(1);
+    helper.extensions.addExtensionToVariant('comp1', 'teambit.pkg/pkg', {
+      packageJson: {
+        name: 'once',
+      },
+    });
+    helper.bitJsonc.addKeyValToDependencyResolver('policy', {
+      dependencies: {
+        'map-limit': '0.0.1', // this dependency has "once" in dependencies
+      },
+    });
+    helper.command.install();
+  });
+  it('should not override the linked local component with a dependency from the registry', () => {
+    // The "once" from the registry doesn't have a dist directory
+    expect(path.join(helper.fixtures.scopes.localPath, 'node_modules/once/dist')).to.be.a.path();
+  });
+  it('should nest the dependency from the registry into the dependent package\'s node_modules', () => {
+    expect(path.join(helper.fixtures.scopes.localPath, 'node_modules/map-limit/node_modules/once/package.json')).to.be.a.path();
+  });
+});
+