The pipeline is designed for identification circular contigs from WGS data.
The pipeline has been applied to a plasmid-enriched metagenome and discovered a number of novel and known plasmids.
Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome. Jørgensen TS, Xu Z, Hansen MA, Sørensen SJ, Hansen LH. (PMID:24503942)