Mass removal of version switches #102
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ehwenk
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Nov 19, 2024
As discussed in issue #92, the goal of this upgrade was to: 1. Discontinue support for AusTraits version < 4.2.0 - Mass removal of switch functions that controlled function behaviour depending on AusTraits version (Issue #102, issue #91) - Creation of check_compatibility() (Issue #100) - Console messaging alerting user which version of AusTraits is supported by which functions (Issue #100) - Updated documentation guiding user on how to install an older version of the R package for backwards compatibility (Issue #93) 2. Introduce new traits.build 'wrangling output' functions into austraits - flatten_database added to austraits (Issue #105) - bind_databases added to austraits (Issue #106) 3. Reduce redundancy across traits.build and austraits to streamline codebase maintenance - plot_trait_beeswarm moved back to austraits - trait_pivot_ moved back to austraits 4. Refactor {austraits} functions to support other traits.build databases and allow functionality across more tables and columns. - join_ functions (Issue #91) - extract_ functions (Issue #107) - Rename argument names (Issue #115) 5. Update documentation accordingly - Pointing to APD and traits.build-book directly in README and vignette Update documentation in {austraits} for changes in version 3.0.0 #96 Update documentation with reference to manual #74 Added cheatsheet ________________________ co-authored by @ehwenk and @dfalster
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Addresses #91
Removal of switches
extract_*trait_pivot_widerjoin_*plot_locationsplot_trait_beeswarmas_wide_tableChanges to existing functions
plot_locationsandtrait_pivot_widernow accepts either traits table ORtraits.buildlist objectsummarise_trait_meanswill trigger warning due to uninformed calculation of means.Deprecations
plot_site_locationsandtrait_pivot_longerare deprecatedAddition of helper functions to assist with removal of switches