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## Table of Contents | ||
- [Overview](#Overview) | ||
- [Citation](#Citation) | ||
- [Contact](#Contact) | ||
- [Installation](#Installation) | ||
- [ISEScan on linux](#install-on-linux) | ||
- [ISEScan on mac](#install-on-mac) | ||
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- [How to run a set of genomes in a row](#lots-of-genomes) | ||
- [Re-run ISEScan without gene/protein prediction and HMMER searching](#Re-run) | ||
- [Release History](#Release) | ||
- [Contact](#Contact) | ||
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<a name="Overview"></a> | ||
## Overview | ||
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Download: [full text](https://doi.org/10.1093/bioinformatics/btx433), [SupplementaryMaterials.docx](publication/SupplementaryMaterials.docx), [SupplementaryMaterials.xlsx](publication/SupplementaryMaterials.xlsx). | ||
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<a name="Contact"></a> | ||
## Contact | ||
Zhiqun Xie: `[email protected]` | ||
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<a name="Installation"></a> | ||
## Installation | ||
<a name="install-on-linux"></a> | ||
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- Add option in `constants.py` to report either complete IS elements or both complete and partial IS elements | ||
- 1.0 | ||
- The first proper release | ||
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<a name="Contact"></a> | ||
## Contact | ||
Zhiqun Xie: `[email protected]` |