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ycphs · Aug 9, 2021 · a1f47ba · a1f47ba
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diff --git a/revdep/README.md b/revdep/README.md
@@ -10,7 +10,7 @@
 |collate  |C.UTF-8                      |
 |ctype    |C.UTF-8                      |
 |tz       |UTC                          |
-|date     |2021-08-04                   |
+|date     |2021-08-09                   |
 
 # Dependencies
 
@@ -23,12 +23,13 @@
 
 # Revdeps
 
-## Failed to check (27)
+## Failed to check (30)
 
 |package        |version |error |warning |note |
 |:--------------|:-------|:-----|:-------|:----|
 |appreci8R      |?       |      |        |     |
 |artMS          |?       |      |        |     |
+|cbaf           |?       |      |        |     |
 |CHRONOS        |?       |      |        |     |
 |CNVPanelizer   |?       |      |        |     |
 |DAPAR          |?       |      |        |     |
@@ -50,7 +51,9 @@
 |SEtools        |?       |      |        |     |
 |sigFeature     |?       |      |        |     |
 |stplanr        |?       |      |        |     |
+|struct         |?       |      |        |     |
 |structToolbox  |?       |      |        |     |
+|TarSeqQC       |?       |      |        |     |
 |TPP            |3.20.1  |1     |        |3    |
 |uncoverappLib  |?       |      |        |     |
 |upstartr       |?       |      |        |     |

diff --git a/revdep/failures.md b/revdep/failures.md
@@ -17,6 +17,67 @@
 
 
 
+Error in download.file(url, destfile, method, mode = "wb", ...) : 
+  download from 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz' failed
+In addition: Warning messages:
+1: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 1166327808 != reported length 1623464748
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 1166327808 != reported length 1623464748
+3: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz': Timeout of 60 seconds was reached
+4: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz': Timeout of 60 seconds was reached
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘MafDb.1Kgenomes.phase3.hs37d5’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘MafDb.1Kgenomes.phase3.hs37d5’ failed
+
+
+```
+### CRAN
+
+```
+
+
+
+Error in download.file(url, destfile, method, mode = "wb", ...) : 
+  download from 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz' failed
+In addition: Warning messages:
+1: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 1166327808 != reported length 1623464748
+2: In download.file(url, destfile, method, mode = "wb", ...) :
+  downloaded length 1166327808 != reported length 1623464748
+3: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz': Timeout of 60 seconds was reached
+4: In download.file(url, destfile, method, mode = "wb", ...) :
+  URL 'https://bioconductor.org/packages/3.13/data/annotation/src/contrib/MafDb.1Kgenomes.phase3.hs37d5_3.10.0.tar.gz': Timeout of 60 seconds was reached
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘MafDb.1Kgenomes.phase3.hs37d5’ failed
+Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
+  download of package ‘MafDb.1Kgenomes.phase3.hs37d5’ failed
+
+
+```
+# artMS
+
+<details>
+
+* Version: 
+* GitHub: https://github.com/ycphs/openxlsx
+* Source code: NA
+* Number of recursive dependencies: 0
+
+</details>
+
+## Error before installation
+
+### Devel
+
+```
+
+
+
 
 
 
@@ -31,7 +92,7 @@
 
 
 ```
-# artMS
+# cbaf
 
 <details>
 
@@ -783,6 +844,39 @@ ERROR: lazy loading failed for package ‘hypeR’
 
 
 
+```
+# struct
+
+<details>
+
+* Version: 
+* GitHub: https://github.com/ycphs/openxlsx
+* Source code: NA
+* Number of recursive dependencies: 0
+
+</details>
+
+## Error before installation
+
+### Devel
+
+```
+
+
+
+
+
+
+```
+### CRAN
+
+```
+
+
+
+
+
+
 ```
 # structToolbox
 
@@ -816,6 +910,39 @@ ERROR: lazy loading failed for package ‘hypeR’
 
 
 
+```
+# TarSeqQC
+
+<details>
+
+* Version: 
+* GitHub: https://github.com/ycphs/openxlsx
+* Source code: NA
+* Number of recursive dependencies: 0
+
+</details>
+
+## Error before installation
+
+### Devel
+
+```
+
+
+
+
+
+
+```
+### CRAN
+
+```
+
+
+
+
+
+
 ```
 # TPP