Code

Read AMR domains lazily#4734

Code

Merged

matthewturk merged 38 commits intoyt-project:mainyt-project/yt:mainfrom cphyc:RAMSES-lazy-loadingcphyc/yt:RAMSES-lazy-loadingCopy head branch name to clipboardDec 6, 2023

+522-401

Commits

Commits on Dec 6, 2023

• Read AMR domains lazily

  cphyc

  committed
  6bd9592

  Copy full SHA for 6bd9592

• Statically compute hydro offsets

  cphyc

  committed
  1117bb9

  Copy full SHA for 1117bb9

• Cache read_fluid_file_descriptor

  cphyc

  committed
  8231e1d

  Copy full SHA for 8231e1d

• Delay as much as possible reading AMR

  cphyc

  committed
  7fc18ee

  Copy full SHA for 7fc18ee

• Use os.path.getsize ot measure file len

  cphyc

  committed
  1266f13

  Copy full SHA for 1266f13

• Fix typo

  cphyc

  committed
  31c3eb5

  Copy full SHA for 31c3eb5

• Trust more conservative Hilbert indexing for fast chunking

  cphyc

  committed
  0b4b4a8

  Copy full SHA for 0b4b4a8

• Do not trigger oct_handler construction

  cphyc

  committed
  26c01c3

  Copy full SHA for 26c01c3

• Handle case where reading is a bit too optimistic

  cphyc

  committed
  23f3f28

  Copy full SHA for 23f3f28

• Use own version of the oct handler for stream dataset

  cphyc

  committed
  ad4648f

  Copy full SHA for ad4648f

• Use oct_handler to refine selection is already created

  cphyc

  committed
  a02cb16

  Copy full SHA for a02cb16

• Reduce verbosity

  cphyc

  committed
  d2139eb

  Copy full SHA for d2139eb

• oct_handler should be a read-only property

  cphyc

  committed
  4ac917d

  Copy full SHA for 4ac917d

• Implement oct_handler for ART

  cphyc

  committed
  378a103

  Copy full SHA for 378a103

• Fix broken test

  cphyc

  committed
  aaefe7c

  Copy full SHA for aaefe7c

• Make hilbert lookup faster

  cphyc

  committed
  62f923b

  Copy full SHA for 62f923b

• Raise an error if we get weird results with max_level

  cphyc

  committed
  52162fe

  Copy full SHA for 52162fe

• Fix max level

  cphyc

  committed
  02749b4

  Copy full SHA for 02749b4

• Remove print statement

  cphyc

  committed
  bc92ac8

  Copy full SHA for bc92ac8

• For convex regions, do an early break when the selector fully contains a cell

  cphyc

  committed
  a833f06

  Copy full SHA for a833f06

• Info specific to the choice of selector

  cphyc

  committed
  1ebbb2c

  Copy full SHA for 1ebbb2c

• Fix issue when there are no selected regions

  cphyc

  committed
  4348492

  Copy full SHA for 4348492

• Fix typing

  cphyc

  committed
  bd1c02e

  Copy full SHA for bd1c02e

• Infer dtype from record length

  cphyc

  committed
  7a0d486

  Copy full SHA for 7a0d486

• Quote np.ndarray typing for numpy<1.22

  cphyc

  committed
  b1a013d

  Copy full SHA for b1a013d

• Remove double "#"

  Show description for 71a074a
  

  cphyc

  and

  neutrinoceros

  committed
  71a074a

  Copy full SHA for 71a074a

• Do not create single-use variable

  Show description for 14f3e83
  

  cphyc

  and

  neutrinoceros

  committed
  14f3e83

  Copy full SHA for 14f3e83

• Move state diagram out of function to prevent costly alloc/dealloc

  cphyc

  committed
  8ddb5d5

  Copy full SHA for 8ddb5d5

• Remove comment that pertains to broken code

  cphyc

  committed
  a7302ed

  Copy full SHA for a7302ed

• Remove arbitrary limitation to LRU cache size

  cphyc

  committed
  19996e3

  Copy full SHA for 19996e3

• Make attributes private

  cphyc

  committed
  1e08c62

  Copy full SHA for 1e08c62

• Name function more explicitly

  cphyc

  committed
  c7d6703

  Copy full SHA for c7d6703

• Lazy-read particle files

  cphyc

  committed
  526b7a5

  Copy full SHA for 526b7a5

• Improve typing

  cphyc

  committed
  685961f

  Copy full SHA for 685961f

• Remove duplicated desc

  cphyc

  committed
  a778a94

  Copy full SHA for a778a94

• Reuse detection of gravity fields

  cphyc

  committed
  502ce2a

  Copy full SHA for 502ce2a

• Move properties to ParticleFileHandler

  cphyc

  committed
  51ce380

  Copy full SHA for 51ce380

• Fix typing

  cphyc

  committed
  bcf3447

  Copy full SHA for bcf3447