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Y. Laizet edited this page May 28, 2018 · 5 revisions

CLINICAL

HL7 v3 Code System AdministrativeGender

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
M Male FHIR (HL7) v3 http://hl7.org/fhir/v3/AdministrativeGender/index.html Enumerated String C2 HL7 v3 Code System AdministrativeGender Patient Gender Patient_Gender
F Female FHIR (HL7) v3 http://hl7.org/fhir/v3/AdministrativeGender/index.html Enumerated String C2 HL7 v3 Code System AdministrativeGender Patient Gender Patient_Gender
UN Undifferentiated FHIR (HL7) v3 http://hl7.org/fhir/v3/AdministrativeGender/index.html Enumerated String C2 HL7 v3 Code System AdministrativeGender Patient Gender Patient_Gender

HL7 v3 Code System Race

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
HL7:1002-5 American Indian or Alaska Native FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:1004-1 American Indian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2028-9 Asian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2029-7 Asian Indian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2030-5 Bangladeshi FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2031-3 Bhutanese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2032-1 Burmese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2033-9 Cambodian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2034-7 Chinese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2035-4 Taiwanese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2036-2 Filipino FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2037-0 Hmong FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2038-8 Indonesian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2039-6 Japanese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2040-4 Korean FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2041-2 Laotian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2042-0 Malaysian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2043-8 Okinawan FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2044-6 Pakistani FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2045-3 Sri Lankan FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2046-1 Thai FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2047-9 Vietnamese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2048-7 Iwo Jiman FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2049-5 Maldivian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2050-3 Nepalese FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2051-1 Singaporean FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2052-9 Madagascar FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2054-5 Black or African American FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2056-0 Black FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2058-6 African American FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2060-2 African FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2067-7 Bahamian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2068-5 Barbadian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2069-3 Dominican FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2070-1 Dominica Islander FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2071-9 Haitian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2072-7 Jamaican FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2073-5 Tobagoan FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2074-3 Trinidadian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2075-0 West Indian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2076-8 Native Hawaiian or Other Pacific Islander FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2078-4 Polynesian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2085-9 Micronesian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2100-6 Melanesian FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2500-7 Other Pacific Islander FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2106-3 White FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2108-9 European FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2118-8 Middle Eastern or North African FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity
HL7:2129-5 Arab FHIR (HL7) v3 https://www.hl7.org/fhir/v3/Race/index.html Enumerated String C3 HL7 v3 Code System Race Patient Ethnicity Patient_Ethnicity

UMLS:C0007465

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C0277589 Death of unknown cause UMLS https://uts.nlm.nih.gov/metathesaurus.html#C0277589;0;1;CUI;2016AA;EXACT_MATCH;CUI;*; Enumerated String C7 UMLS:C0007465 Patient CauseOfDeath Patient_CauseOfDeath
UMLS:C1707251 Other cancer UMLS https://uts.nlm.nih.gov/metathesaurus.html#C1707251;0;1;CUI;2016AA;EXACT_MATCH;CUI;*; Enumerated String C7 UMLS:C0007465 Patient CauseOfDeath Patient_CauseOfDeath
UMLS:C3262234 Other cause UMLS https://uts.nlm.nih.gov/metathesaurus.html#C3262234;0;1;CUI;2016AA;EXACT_MATCH;CUI;*; Enumerated String C7 UMLS:C0007465 Patient CauseOfDeath Patient_CauseOfDeath
UMLS:C0679861 Complications of treatment UMLS https://uts.nlm.nih.gov/metathesaurus.html#C0679861;0;1;CUI;2016AA;EXACT_MATCH;CUI;*; Enumerated String C7 UMLS:C0007465 Patient CauseOfDeath Patient_CauseOfDeath
UMLS:C0027651 Neoplasm UMLS https://uts.nlm.nih.gov/metathesaurus.html#C0027651;0;1;CUI;2016AA;EXACT_MATCH;CUI;*; Enumerated String C7 UMLS:C0007465 Patient CauseOfDeath Patient_CauseOfDeath

ICD-10

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
ICD-10 cf. ICD-10 ICD-10 http://apps.who.int/classifications/icd10/browse/2016/en Enumerated String C13 ICD-10 RelatedPathology PathologyCode RelatedPathology_PathologyCode

CIM-O-3 Topo

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
ICD-O-3-TOPO cf. ICD-O-3-TOPO CIM-O-3 Topo http://codes.iarc.fr/topography Enumerated String C17 CIM-O-3 Topo CancerHistory TopographyCode CancerHistory_TopographyCode

OSIRIS:FamilyCancerHistoryParentage

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C0037047 Sibling UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0030551 Parent UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0015671 Father UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0026591 Mother UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3844804 Paternal cousin UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3844805 Maternal cousin UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3242761 Maternal grandparent UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3242764 Paternal grandparent UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C1273524 Paternal grandmother UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C1273525 Maternal grandmother UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C1273523 Maternal grandfather UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C1273522 Paternal grandfather UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0337471 Grandparent UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0337577 Uncle UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3714276 Paternal uncle UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3714277 Maternal uncle UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0337576 Aunt UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3714274 Paternal aunt UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C3714275 Maternal aunt UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
UMLS:C0337580 Cousin UMLS Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
OSIRIS:C77-6 Other ICGC https://github.com/icgc-dcc/dcc-docs/blob/master/docs/dictionary/release-20/donor-family.md Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage
OSIRIS:C77-7 Unknown ICGC https://github.com/icgc-dcc/dcc-docs/blob/master/docs/dictionary/release-20/donor-family.md Enumerated String C77 OSIRIS:FamilyCancerHistoryParentage FamilyCancerHistory Parentage FamilyCancerHistory_Parentage

OSIRIS:EventType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C1882062 Neoplasm UMLS Enumerated String C20 OSIRIS:EventType TumorPathologyEvent Type TumorPathologyEvent_Type
UMLS:C2939419 Metastatic Malignant Neoplasm (NCI:C36263) UMLS Enumerated String C20 OSIRIS:EventType TumorPathologyEvent Type TumorPathologyEvent_Type
UMLS:C0521158 Recurrent tumor UMLS Enumerated String C20 OSIRIS:EventType TumorPathologyEvent Type TumorPathologyEvent_Type
UMLS:C0677930 Primary tumor UMLS Enumerated String C20 OSIRIS:EventType TumorPathologyEvent Type TumorPathologyEvent_Type

OMS

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
0 activité normale sans restriction OMS Enumerated String C22 OMS TumorPathologyEvent PerformanceStatus TumorPathologyEvent_PerformanceStatus
1 restreint pour des activités physiques importantes, mais patient ambulant et capable de fournir un travail léger OMS Enumerated String C22 OMS TumorPathologyEvent PerformanceStatus TumorPathologyEvent_PerformanceStatus
2 ambulant et capable de se prendre en charge, mais incapable de fournir un travail et alité pendant moins de 50 % de son temps OMS Enumerated String C22 OMS TumorPathologyEvent PerformanceStatus TumorPathologyEvent_PerformanceStatus
3 capacité de prise en charge propre beaucoup plus limitée. Passe plus de 50 % de son temps au lit ou dans une chaise. OMS Enumerated String C22 OMS TumorPathologyEvent PerformanceStatus TumorPathologyEvent_PerformanceStatus
4 complètement grabataire. Incapable de se prendre en charge. Le patient reste totalement confiné au lit ou dans une chaise. OMS Enumerated String C22 OMS TumorPathologyEvent PerformanceStatus TumorPathologyEvent_PerformanceStatus

G8

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
nonEnumerated Integer C23 G8 TumorPathologyEvent G8 TumorPathologyEvent_G8

OSIRIS:T_TNM

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
Tx Tx Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T0 T0 Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T1 T1 Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T1a T1a Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T1b T1b Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T1c T1c Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T2 T2 Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T3 T3 Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T4 T4 Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T4a T4a Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T4b T4b Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T4c T4c Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T
T4d T4d Enumerated String C24 OSIRIS:T_TNM TumorPathologyEvent T TumorPathologyEvent_T

OSIRIS:N_TNM

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
Nx Nx Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N
N0 N0 Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N
N1mi N1mi Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N
N1 N1 Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N
N2 N2 Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N
N3 N3 Enumerated String C25 OSIRIS:N_TNM TumorPathologyEvent N TumorPathologyEvent_N

OSIRIS:M_TNM

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
Mx Mx Enumerated String C26 OSIRIS:M_TNM TumorPathologyEvent M TumorPathologyEvent_M
M0 M0 Enumerated String C26 OSIRIS:M_TNM TumorPathologyEvent M TumorPathologyEvent_M
M1 M1 Enumerated String C26 OSIRIS:M_TNM TumorPathologyEvent M TumorPathologyEvent_M

OSIRIS:TNMVersion

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UICC TNM Classification 7th edition UICC TNM Classification 7th edition Enumerated String C27 OSIRIS:TNMVersion TumorPathologyEvent TNMVersion TumorPathologyEvent_TNMVersion

OSIRIS:TNMType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
c Clinique Enumerated String C28 OSIRIS:TNMType TumorPathologyEvent TNMType TumorPathologyEvent_TNMType
p Pathologique Enumerated String C28 OSIRIS:TNMType TumorPathologyEvent TNMType TumorPathologyEvent_TNMType
y Après traitement neoadjuvant Enumerated String C28 OSIRIS:TNMType TumorPathologyEvent TNMType TumorPathologyEvent_TNMType
u Radiologique Enumerated String C28 OSIRIS:TNMType TumorPathologyEvent TNMType TumorPathologyEvent_TNMType

OSIRIS:HistologicalGradeType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
SBR, ... C29 OSIRIS:HistologicalGradeType TumorPathologyEvent HistologicalGradeType TumorPathologyEvent_HistologicalGradeType

OSIRIS:HistologicalGradeValue

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
C30 OSIRIS:HistologicalGradeValue TumorPathologyEvent HistologicalGradeValue TumorPathologyEvent_HistologicalGradeValue

OSIRIS:StadeType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
C31 OSIRIS:StadeType TumorPathologyEvent StadeType TumorPathologyEvent_StadeType

OSIRIS:StadeValue

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
C32 OSIRIS:StadeValue TumorPathologyEvent StadeValue TumorPathologyEvent_StadeValue

CIM-O-3 Morpho

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
ICD-O-3-MORPHO cf. ICD-O-3-MORPHO CIM-O-3 Morpho http://codes.iarc.fr/codegroup/2 Enumerated String C35 CIM-O-3 Morpho TumorPathologyEvent MorphologyCode TumorPathologyEvent_MorphologyCode

OSIRIS:Laterality

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C0238767 Bilateral UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality
UMLS:C0205091 Left UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality
UMLS:C2939193 Median (qualifier value) UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality
UMLS:C1272460 Not Applicable UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality
UMLS:C0205090 Right UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality
UMLS:C0439673 Unknown UMLS Enumerated String C36 OSIRIS:Laterality TumorPathologyEvent Laterality TumorPathologyEvent_Laterality

OSIRIS:AnalysisCode

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
nonEnumerated String C70 OSIRIS:AnalysisCode Analysis Code Analysis_Code

OSIRIS:AnalysisType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:C37-1 Biology Enumerated String C37 OSIRIS:AnalysisType Analysis Type Analysis_Type
OSIRIS:C37-2 Imaging Enumerated String C37 OSIRIS:AnalysisType Analysis Type Analysis_Type
OSIRIS:C37-3 Omic Enumerated String C37 OSIRIS:AnalysisType Analysis Type Analysis_Type
OSIRIS:C37-4 Pathology Enumerated String C37 OSIRIS:AnalysisType Analysis Type Analysis_Type

OSIRIS:TreatmentType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C3665472 Chemotherapy UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0279025 Hormone therapy UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C1522449 Therapeutic radiology procedure UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0728940 Surgery UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0006098 Brachytherapy UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0021083 Immunotherapy UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0005961 Bone marrow transplant UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
UMLS:C0279694 Monoclonal antibody UMLS Enumerated String C41 OSIRIS:TreatmentType Treatment Type Treatment_Type
nonEnumerated Integer C74 OSIRIS:TreatmentType

CCAM

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
CCAM cf. CCAM CCAM http://www.ameli.fr/accueil-de-la-ccam/index.php Enumerated String C42 CCAM Treatment ActivityCode Treatment_ActivityCode

ICGC

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
R0 No apparent residual disease ICGC Enumerated String C46 ICGC Treatment SurgeryResectionQuality Treatment_SurgeryResectionQuality
R1 Microscopic residual disease ICGC Enumerated String C46 ICGC Treatment SurgeryResectionQuality Treatment_SurgeryResectionQuality
R2 Gross residual disease ICGC Enumerated String C46 ICGC Treatment SurgeryResectionQuality Treatment_SurgeryResectionQuality

ATC 5e niveau

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
ATC cf. ATC ATC 5e niveau Enumerated String C51 ATC 5e niveau Drug Code Drug_Code
ATC cf. ATC ATC 5e niveau Enumerated String C52 ATC 5e niveau Drug Name Drug_Name

MIABIS-39

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
MIABIS-39 cf. MIABIS-39 MIABIS-39 https://github.com/MIABIS/miabis/wiki/Data-describing-Sample nonEnumerated String C53 MIABIS-39 BiologicalSample SampleExternalAccession BiologicalSample_SampleExternalAccession

MIABIS-40

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
MIABIS-40 cf. MIABIS-40 MIABIS-40 https://github.com/MIABIS/miabis/wiki/Data-describing-Sample nonEnumerated String C54 MIABIS-40 BiologicalSample ParentSampleExternalAccession BiologicalSample_ParentSampleExternalAccession

MIABIS-43

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
MIABIS-43 cf. MIABIS-43 MIABIS-43 https://github.com/MIABIS/miabis/wiki/Data-describing-Sample nonEnumerated Date C56 MIABIS-43 BiologicalSample CollectDate BiologicalSample_CollectDate

MIABIS-41

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UMLS:C0005767 Blood MIABIS-41/MIABIS-2.0-14 https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type Enumerated String C58 MIABIS-41 BiologicalSample Nature BiologicalSample_Nature
UMLS:C0085983 Tumor Cell Line MIABIS-41/MIABIS-2.0-14 https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type Enumerated String C58 MIABIS-41 BiologicalSample Nature BiologicalSample_Nature
UMLS:C4039816 Frozen tissue MIABIS-41/MIABIS-2.0-14 https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type Enumerated String C58 MIABIS-41 BiologicalSample Nature BiologicalSample_Nature
UMLS:C1519524 Paraffin Embedded Tissue (FFPE) MIABIS-41/MIABIS-2.0-14 https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type Enumerated String C58 MIABIS-41 BiologicalSample Nature BiologicalSample_Nature

OSIRIS:SampleOrigin

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O59-1 Normal OSIRIS Enumerated String C59 OSIRIS:SampleOrigin BiologicalSample Origin BiologicalSample_Origin
OSIRIS:O59-2 Tumoral OSIRIS Enumerated String C59 OSIRIS:SampleOrigin BiologicalSample Origin BiologicalSample_Origin

OMIC

OSIRIS:TechnicalProtocol

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O6-1 ChIP-on-Chip OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-2 ChIP-seq OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-3 DNA microarray OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-4 DNA targeted panel sequencing OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-5 Exome sequencing OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-6 Mass spectrometry OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-7 MeDIP-Chip OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-8 MeDIP-seq OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-9 Methylation microarray OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-10 RNA microarray OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-11 RNA targeted panel sequencing OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-12 RNA-seq OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-13 RPPA OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-14 Whole genome bisulfite sequencing OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-15 Whole genome sequencing OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol
OSIRIS:O6-16 miRNA microarray OSIRIS Enumerated String O6 OSIRIS:TechnicalProtocol Technology TechnicalProtocol Technology_TechnicalProtocol

OSIRIS:PlatformName

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O7-1 Affymetrix Cytoscan HD OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-2 Affymetrix EMET Plus Premier Pack OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-3 Affymetrix Genome-Wide Human SNP Array 5.0 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-4 Affymetrix Genome-Wide Human SNP Array 6.0 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-5 Affymetrix HT Human Genome U133A Array Plate Set OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-6 Affymetrix Human Exon 1.0 ST OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-7 Affymetrix Human Gene 1.0 ST OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-8 Affymetrix Human Genome U219 Array Plate OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-9 Affymetrix Human MIP 330K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-10 Affymetrix Human U133 Plus 2.0 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-11 Affymetrix Human U133 Plus PM OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-12 Affymetrix Mapping 100K Array Set OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-13 Affymetrix Mapping 10K 2.0 Array Set OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-14 Affymetrix Mapping 500K Array Set OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-15 Affymetrix OncoScan FFPE Express 2.0 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-16 Agilent 244K Custom Gene Expression G4502A-07 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-17 Agilent 244K Custom Gene Expression G4502A-07-1 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-18 Agilent 244K Custom Gene Expression G4502A-07-2 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-19 Agilent 244K Custom Gene Expression G4502A-07-3 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-20 Agilent 8 x 15K Human miRNA-specific microarray OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-21 Agilent Human CGH 1x1M OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-22 Agilent Human CGH 2x400K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-23 Agilent Human CGH 4x180K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-24 Agilent Human CGH 8x60K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-25 Agilent Human CNV 2x400K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-26 Agilent Human CNV Association 2x105K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-27 Agilent Human CpG Island Microarray Kit OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-28 Agilent Human Genome 105A OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-29 Agilent Human Genome 244A OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-30 Agilent Human Genome 44K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-31 Agilent Human Genome CGH Custom Microaary 2x415K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-32 Agilent Human miRNA Microarray Kit (v2) OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-33 Agilent Human Promoter ChIP-on-chip Microarray Set OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-34 Agilent Human SpliceArray OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-35 Agilent Whole Human Genome Oligo Microarray Kit OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-36 Almac Human CRC OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-37 capillary sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-38 Complete Genomics OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-39 Custom-designed cDNA array OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-40 Custom-designed gene expression array OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-41 Helicos sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-42 HumanOmni2.5-8 BeadChip Kit OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-43 Illumina GA sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-44 Illumina goldengate methylation OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-45 Illumina GoldenGate Methylation Cancer Panel I OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-46 Illumina HiSeq OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-47 Illumina HiSeq X Ten OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-48 Illumina Human Omni1-Quad beadchip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-49 Illumina Human1M OmniQuad chip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-50 Illumina human1m-duo OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-51 Illumina human510s-duo OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-52 Illumina human660w-quad OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-53 Illumina HumanCNV370-Duo v1.0 BeadChip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-54 Illumina humancytosnp-12 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-55 Illumina HumanHap550 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-56 Illumina HumanHT-12 v4.0 beadchip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-57 Illumina humanht-16 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-58 Illumina humanht-17 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-59 Illumina humanmethylation27 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-60 Illumina HumanOmniExpress BeadChip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-61 Illumina HumanRef-8 v3.0 beadchip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-62 Illumina HumanWG-6 v3.0 beadchip OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-63 Illumina Infinium HumanMethylation450 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-64 Illumina microRNA Expression Profiling Panel OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-65 Illumina MiSeq Personal Sequencer OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-66 Ion Torrent PGM OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-67 Ion Torrent Proton OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-68 M.D. Anderson Reverse Phase Protein Array Core OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-69 Microsatellite Instability Analysis OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-70 nanoString OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-71 Nimblegen CGS OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-72 Nimblegen Gene Expression 12x135K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-73 Nimblegen Gene Expression 385K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-74 Nimblegen Gene Expression 4x72K OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-75 Nimblegen Human CGH 2.1M Whole-Genome v2.0D Array OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-76 Nimblegen Human CGH 3x720 Whole-Genome v3.0 Array OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-77 Nimblegen Human Methylation 2.1M Whole-Genome sets OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-78 Nimblegen Human Methylation 385K Whole-Genome sets OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-79 PacBio RS sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-80 PCR OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-81 PCR and capillary sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-82 qPCR OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-83 Roche 454 sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-84 Sequenom MassARRAY OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-85 SOLiD sequencing OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-86 Digital PCR OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-87 NextSeq 500 OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName
OSIRIS:O7-88 NovaSeq OSIRIS Enumerated String O7 OSIRIS:PlatformName Technology PlatformName Technology_PlatformName

OSIRIS:PlatformAccession

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O8 OSIRIS:PlatformAccession Technology PlatformAccession Technology_PlatformAccession

OSIRIS:DateOfExperiment

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Date O9 OSIRIS:DateOfExperiment Technology DateOfExperiment Technology_DateOfExperiment

OSIRIS:PanelName

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O10-0 Not applicable OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-1 Ion AmpliSeq Cancer Hotspot Panel v2 OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-2 Ion AmpliSeq Colon and Lung Cancer Research Panel v2 OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-3 Ion AmpliSeq Comprehensive Cancer Panel OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-4 Ion AmpliSeq Oncomine Comprehensive Assay OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-5 Ion AmpliSeq Oncomine Focus Assay OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-6 Ion AmpliSeq TP53 Research Panel OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-7 Lyric: Ion AmpliSeq Profiler OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-8 QIAGEN GeneRead DNAseq Targeted Panels V2 OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-9 SAFIR02 Panel OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name
OSIRIS:O10-10 Mosc3 OSIRIS Enumerated String O10 OSIRIS:PanelName Panel Name Panel_Name

OSIRIS:AnalyticPipelineCode

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O11 OSIRIS:AnalyticPipelineCode AnalysisProcess AnalyticPipelineCode AnalysisProcess_AnalyticPipelineCode

OSIRIS:AlgorithmicCellularity

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O12 OSIRIS:AlgorithmicCellularity OmicAnalysis AlgorithmicCellularity OmicAnalysis_AlgorithmicCellularity

OSIRIS:AlgorithmicPloïdy

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O13-1 Haploid OSIRIS Enumerated String O13 OSIRIS:AlgorithmicPloïdy OmicAnalysis AlgorithmicPloidy OmicAnalysis_AlgorithmicPloidy
OSIRIS:O13-2 Diploid OSIRIS Enumerated String O13 OSIRIS:AlgorithmicPloïdy OmicAnalysis AlgorithmicPloidy OmicAnalysis_AlgorithmicPloidy
OSIRIS:O13-3 Triploid OSIRIS Enumerated String O13 OSIRIS:AlgorithmicPloïdy OmicAnalysis AlgorithmicPloidy OmicAnalysis_AlgorithmicPloidy
OSIRIS:O13-4 Tetraploid OSIRIS Enumerated String O13 OSIRIS:AlgorithmicPloïdy OmicAnalysis AlgorithmicPloidy OmicAnalysis_AlgorithmicPloidy
OSIRIS:O13-0 Not available OSIRIS Enumerated String O13 OSIRIS:AlgorithmicPloïdy OmicAnalysis AlgorithmicPloidy OmicAnalysis_AlgorithmicPloidy

OSIRIS:NumberOfBreakPoints

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O14 OSIRIS:NumberOfBreakPoints OmicAnalysis NumberOfBreakPoints OmicAnalysis_NumberOfBreakPoints

OSIRIS:AlterationType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O15-1 Gene expression OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-2 Protein expression OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-3 Fusion OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-4 Copy number variation OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-5 Genetic variant OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-6 Structural alteration OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-7 Transcription factor OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-8 Histone marks OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-9 Transcript isoform OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType
OSIRIS:O15-10 Viral insertion site OSIRIS Enumerated String O15 OSIRIS:AlterationType AlterationOnSample AlterationType AlterationOnSample_AlterationType

OSIRIS:ValidationType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O16-1 Experimental OSIRIS Enumerated String O16 OSIRIS:ValidationType Validation Type Validation_Type
OSIRIS:O16-2 By biologist OSIRIS Enumerated String O16 OSIRIS:ValidationType Validation Type Validation_Type
OSIRIS:O16-3 In silico OSIRIS Enumerated String O16 OSIRIS:ValidationType Validation Type Validation_Type

OSIRIS:ValidationMethod

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O17 OSIRIS:ValidationMethod Validation Method Validation_Method

OSIRIS:ValidationStatus

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O18-1 Not Validated OSIRIS Enumerated String O18 OSIRIS:ValidationStatus Validation Status Validation_Status
OSIRIS:O18-2 Validated OSIRIS Enumerated String O18 OSIRIS:ValidationStatus Validation Status Validation_Status

OSIRIS:Chromosome

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA21254-0 chr1 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21255-7 chr2 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21256-5 chr3 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21257-3 chr4 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21258-1 chr5 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21259-9 chr6 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21260-7 chr7 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21261-5 chr8 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21262-3 chr9 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21263-1 chr10 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21264-9 chr11 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21265-6 chr12 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21266-4 chr13 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21267-2 chr14 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21268-0 chr15 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21269-8 chr16 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21270-6 chr17 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21271-4 chr18 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21272-2 chr19 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21273-0 chr20 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21274-8 chr21 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21275-5 chr22 OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21276-3 chrX OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
LA21277-1 chrY OSIRIS http://r.details.loinc.org/AnswerList/LL2938-0.html Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
OSIRIS:O19-1 MT OSIRIS Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
OSIRIS:O19-2 viral OSIRIS Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome
OSIRIS:O19-3 bacterial OSIRIS Enumerated String O19 OSIRIS:Chromosome Alteration Chromosome Alteration_Chromosome

FHIR:extension-geneticsGenomicStart

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR (HL7) http://hl7.org/fhir/extension-geneticsgenomicstart.html nonEnumerated Integer O20 FHIR:extension-geneticsGenomicStart Alteration GenomicStart Alteration_GenomicStart

FHIR:extension-geneticsGenomicStop

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR (HL7) http://hl7.org/fhir/extension-geneticsgenomicstop.html nonEnumerated Integer O21 FHIR:extension-geneticsGenomicStop Alteration GenomicStop Alteration_GenomicStop

FHIR:extension-geneticsGenomeBuild

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O22-1 GRCh37 FHIR (HL7) https://www.hl7.org/fhir/extension-geneticsgenomebuild.html Enumerated String O22 FHIR:extension-geneticsGenomeBuild Alteration GenomeBuild Alteration_GenomeBuild
OSIRIS:O22-2 GRCh38 FHIR (HL7) https://www.hl7.org/fhir/extension-geneticsgenomebuild.html Enumerated String O22 FHIR:extension-geneticsGenomeBuild Alteration GenomeBuild Alteration_GenomeBuild

UCSC

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
UCSC cytoband UCSC cytoband UCSC http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz nonEnumerated String O23 UCSC Alteration Cytoband Alteration_Cytoband

OSIRIS:GenomeEntityType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O24-1 gene OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type
OSIRIS:O24-2 miRNA OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type
OSIRIS:O24-3 piRNA OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type
OSIRIS:O24-4 mRNA OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type
OSIRIS:O24-5 ncRNA OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type
OSIRIS:O24-6 ORF OSIRIS Enumerated String O24 OSIRIS:GenomeEntityType GenomeEntity Type GenomeEntity_Type

OSIRIS:GenomeEntityDatabase

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O25-1 HGNC OSIRIS Enumerated String O25 OSIRIS:GenomeEntityDatabase GenomeEntity Database GenomeEntity_Database
OSIRIS:O25-2 miRDB OSIRIS Enumerated String O25 OSIRIS:GenomeEntityDatabase GenomeEntity Database GenomeEntity_Database
OSIRIS:O25-3 Entrez OSIRIS Enumerated String O25 OSIRIS:GenomeEntityDatabase GenomeEntity Database GenomeEntity_Database
OSIRIS:O25-4 Human lincRNA Catalog OSIRIS Enumerated String O25 OSIRIS:GenomeEntityDatabase GenomeEntity Database GenomeEntity_Database

FHIR:extension-observation-geneticsGene

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR http://hl7.org/fhir/2016May/extension-observation-geneticsgene.html nonEnumerated String O26 FHIR:extension-observation-geneticsGene GenomeEntity Id GenomeEntity_Id

LOINC:48018-6

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
HGNC ID HGNC Approved Symbol LOINC http://www.genenames.org/ nonEnumerated String O27 LOINC:48018-6 GenomeEntity Symbol GenomeEntity_Symbol

OSIRIS:FusionType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA26331-1 translocation LOINC http://r.details.loinc.org/LOINC/81289-1.html Enumerated String O28 OSIRIS:FusionType Fusion Type Fusion_Type
OSIRIS:O28-1 readthrough OSIRIS Enumerated String O28 OSIRIS:FusionType Fusion Type Fusion_Type

OSIRIS:Strand

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O94-1 + OSIRIS Enumerated String O94 OSIRIS:Strand Annotation Strand Annotation_Strand
OSIRIS:O94-2 - OSIRIS Enumerated String O94 OSIRIS:Strand Annotation Strand Annotation_Strand

OSIRIS:FusionPoint5prime

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O35 OSIRIS:FusionPoint5prime Fusion Point5prime Fusion_Point5prime

OSIRIS:FusionPoint3prime

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O40 OSIRIS:FusionPoint3prime Fusion Point3prime Fusion_Point3prime

OSIRIS:FusionInFrame

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Boolean O41 OSIRIS:FusionInFrame Fusion InFrame Fusion_InFrame

OSIRIS:FusionAnnotationReferentiel

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O42-1 ChimerDb OSIRIS Enumerated String O91 OSIRIS:FusionAnnotationReferentiel Annotation ReferenceDatabase Annotation_ReferenceDatabase
OSIRIS:O42-2 Oncofuse OSIRIS Enumerated String O91 OSIRIS:FusionAnnotationReferentiel Annotation ReferenceDatabase Annotation_ReferenceDatabase
OSIRIS:O42-3 Mittelman DB OSIRIS Enumerated String O91 OSIRIS:FusionAnnotationReferentiel Annotation ReferenceDatabase Annotation_ReferenceDatabase

OSIRIS:FusionNbSpanningPair

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O44 OSIRIS:FusionNbSpanningPair Fusion NbSpanningPair Fusion_NbSpanningPair

OSIRIS:FusionNbSplitReads

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O46 OSIRIS:FusionNbSplitReads Fusion NbSplitReads Fusion_NbSplitReads

OSIRIS:SegmentIntensity

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Float O47 OSIRIS:SegmentIntensity CNV SegmentIntensity CNV_SegmentIntensity

OSIRIS:SegmentGenomicStatus

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O49-1 Amplification OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-2 Gain OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-3 Normal OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-4 Heterozygous deletion OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-5 Homozygous deletion OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-6 Copy neutral OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus
OSIRIS:O49-7 Isodisomy OSIRIS Enumerated String O49 OSIRIS:SegmentGenomicStatus CNV SegmentGenomicStatus CNV_SegmentGenomicStatus

OSIRIS:CopyNumber

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O50 OSIRIS:CopyNumber CNV CopyNumber CNV_CopyNumber

OSIRIS:LossOfHeterozygosity

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Boolean O51 OSIRIS:LossOfHeterozygosity CNV LOH CNV_LOH

FHIR:Sequence.referenceAllele

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR https://www.hl7.org/fhir/2016Jan/sequence-definitions.html#Sequence.referenceAllele nonEnumerated String O53 FHIR:Sequence.referenceAllele Variant ReferenceAllele Variant_ReferenceAllele

FHIR:Sequence.observedAllele

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR https://www.hl7.org/fhir/2016Jan/sequence-definitions.html#Sequence.observedAllele nonEnumerated String O54 FHIR:Sequence.observedAllele Variant AlternativeAllele Variant_AlternativeAllele

LOINC:48019-4

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA6692-3 Deletion LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
LA6686-5 Duplication LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
LA6687-3 Insertion LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
LA6688-1 Insertion/Deletion (indel) LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
LA6689-9 Inversion LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
LA6690-7 Substitution LOINC http://r.details.loinc.org/LOINC/48019-4.html Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
OSIRIS:O55-1 Virus insertion site LOINC Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType
OSIRIS:O55-2 Delins LOINC Enumerated String O55 LOINC:48019-4 Variant DNASequenceVariationType Variant_DNASequenceVariationType

OSIRIS:PfamDomain

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O58 OSIRIS:PfamDomain Annotation PfamDomain Annotation_PfamDomain

OSIRIS:PfamId

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O59 OSIRIS:PfamId Annotation PfamId Annotation_PfamId

OSIRIS:MutationPredictionAlgorithm

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O63-1 SIFT OSIRIS Enumerated String O63 OSIRIS:MutationPredictionAlgorithm Annotation MutationPredictionAlgorithm Annotation_MutationPredictionAlgorithm
OSIRIS:O63-2 POLYPHEN2_HDIV OSIRIS Enumerated String O63 OSIRIS:MutationPredictionAlgorithm Annotation MutationPredictionAlgorithm Annotation_MutationPredictionAlgorithm

OSIRIS:MutationPredictionValue

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O64 OSIRIS:MutationPredictionValue Annotation MutationPredictionValue Annotation_MutationPredictionValue

OSIRIS:MutationPredictionScore

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Float O65 OSIRIS:MutationPredictionScore Annotation MutationPredictionScore Annotation_MutationPredictionScore

FHIR:extension-observation-geneticsDNARegionName

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR http://hl7.org/fhir/2016May/extension-observation-geneticsdnaregionname.html nonEnumerated String O66 FHIR:extension-observation-geneticsDNARegionName Annotation DNARegionName Annotation_DNARegionName

OSIRIS:ProteinReferenceDatabase

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O91-1 RefSeq OSIRIS Enumerated String O91 OSIRIS:ProteinReferenceDatabase Annotation ReferenceDatabase Annotation_ReferenceDatabase

OSIRIS:TranscriptReferenceDatabase

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O91-2 Ensembl OSIRIS Enumerated String O91 OSIRIS:TranscriptReferenceDatabase Annotation ReferenceDatabase Annotation_ReferenceDatabase

FHIR:extension-observation-geneticsDNASequenceVariation

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR http://hl7.org/fhir/2016May/extension-observation-geneticsdnasequencevariation.html nonEnumerated String O71 FHIR:extension-observation-geneticsDNASequenceVariation Annotation DNASequenceVariation Annotation_DNASequenceVariation

FHIR:extension-observation-geneticsAminoAcidChange

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
FHIR http://hl7.org/fhir/2016May/extension-observation-geneticsaminoacidchange.html nonEnumerated String O72 FHIR:extension-observation-geneticsAminoAcidChange Annotation AminoAcidChange Annotation_AminoAcidChange

OSIRIS:GenomicSequenceVariation

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O73 OSIRIS:GenomicSequenceVariation Annotation GenomicSequenceVariation Annotation_GenomicSequenceVariation

OSIRIS:RNASequenceVariation

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated String O74 OSIRIS:RNASequenceVariation Annotation RNASequenceVariation Annotation_RNASequenceVariation

OSIRIS:AminoAcidChangeType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA6692-3 Deletion LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6686-5 Duplication LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6694-9 Frameshift LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6695-6 Initiating Methionine LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6687-3 Insertion LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA9659-9 Insertion and Deletion LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6698-0 Missense LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6699-8 Nonsense LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6700-4 Silent LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
LA6701-2 Stop Codon Mutation LOINC http://r.details.loinc.org/LOINC/48006-1.html Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType
OSIRIS:O75-1 In frame OSIRIS Enumerated String O75 OSIRIS:AminoAcidChangeType Annotation AminoAcidChangeType Annotation_AminoAcidChangeType

OSIRIS:PositionCoverage

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O76 OSIRIS:PositionCoverage VariantInSample PositionReadDepth VariantInSample_PositionReadDepth

OSIRIS:VariantCoverage

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Integer O77 OSIRIS:VariantCoverage VariantInSample VariantReadDepth VariantInSample_VariantReadDepth

OSIRIS:StrandBias

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Boolean O78 OSIRIS:StrandBias VariantInSample StrandBias VariantInSample_StrandBias

LOINC:LL378-1

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA6683-2 Germline LOINC http://s.details.loinc.org/LOINC/48002-0.html Enumerated String O79 LOINC:LL378-1 VariantInSample GenomicSourceClass VariantInSample_GenomicSourceClass
LA6684-0 Somatic LOINC http://s.details.loinc.org/LOINC/48002-0.html Enumerated String O79 LOINC:LL378-1 VariantInSample GenomicSourceClass VariantInSample_GenomicSourceClass
LA10429-1 Prenatal LOINC http://s.details.loinc.org/LOINC/48002-0.html Enumerated String O79 LOINC:LL378-1 VariantInSample GenomicSourceClass VariantInSample_GenomicSourceClass
LA18197-6 Unknown genomic origin LOINC http://s.details.loinc.org/LOINC/48002-0.html Enumerated String O79 LOINC:LL378-1 VariantInSample GenomicSourceClass VariantInSample_GenomicSourceClass

LOINC:LL381-5

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
LA6703-8 Heteroplasmic LOINC http://s.details.loinc.org/LOINC/53034-5.html Enumerated String O80 LOINC:LL381-5 VariantInSample AllelicState VariantInSample_AllelicState
LA6704-6 Homoplasmic LOINC http://s.details.loinc.org/LOINC/53034-5.html Enumerated String O80 LOINC:LL381-5 VariantInSample AllelicState VariantInSample_AllelicState
LA6705-3 Homozygous LOINC http://s.details.loinc.org/LOINC/53034-5.html Enumerated String O80 LOINC:LL381-5 VariantInSample AllelicState VariantInSample_AllelicState
LA6706-1 Heterozygous LOINC http://s.details.loinc.org/LOINC/53034-5.html Enumerated String O80 LOINC:LL381-5 VariantInSample AllelicState VariantInSample_AllelicState
LA6707-9 Hemizygous LOINC http://s.details.loinc.org/LOINC/53034-5.html Enumerated String O80 LOINC:LL381-5 VariantInSample AllelicState VariantInSample_AllelicState

OSIRIS:AlterationOnSample_Pathogenicity

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O81-1 Pathogenic ACMG https://www.acmg.net/docs/Standards_Guidelines_for_the_Interpretation_of_Sequence_Variants.pdf Enumerated String O81 OSIRIS:AlterationOnSample_Pathogenicity AlterationOnSample Pathogenicity AlterationOnSample_Pathogenicity
OSIRIS:O81-2 Likely pathogenic ACMG https://www.acmg.net/docs/Standards_Guidelines_for_the_Interpretation_of_Sequence_Variants.pdf Enumerated String O81 OSIRIS:AlterationOnSample_Pathogenicity AlterationOnSample Pathogenicity AlterationOnSample_Pathogenicity
OSIRIS:O81-3 Benign ACMG https://www.acmg.net/docs/Standards_Guidelines_for_the_Interpretation_of_Sequence_Variants.pdf Enumerated String O81 OSIRIS:AlterationOnSample_Pathogenicity AlterationOnSample Pathogenicity AlterationOnSample_Pathogenicity
OSIRIS:O81-4 Likely benign ACMG https://www.acmg.net/docs/Standards_Guidelines_for_the_Interpretation_of_Sequence_Variants.pdf Enumerated String O81 OSIRIS:AlterationOnSample_Pathogenicity AlterationOnSample Pathogenicity AlterationOnSample_Pathogenicity
OSIRIS:O81-5 Uncertain significance ACMG https://www.acmg.net/docs/Standards_Guidelines_for_the_Interpretation_of_Sequence_Variants.pdf Enumerated String O81 OSIRIS:AlterationOnSample_Pathogenicity AlterationOnSample Pathogenicity AlterationOnSample_Pathogenicity

OBI

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O82-1 Actionable OSIRIS Enumerated String O82 OBI AlterationOnSample Actionability AlterationOnSample_Actionability
OSIRIS:O82-2 Non actionable OSIRIS Enumerated String O82 OBI AlterationOnSample Actionability AlterationOnSample_Actionability

OSIRIS:ExpressionDataType

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O84-1 RawExpression OSIRIS Enumerated String O84 OSIRIS:ExpressionDataType GeneExpression DataType GeneExpression_DataType
OSIRIS:O84-2 NormalizedExpression OSIRIS Enumerated String O84 OSIRIS:ExpressionDataType GeneExpression DataType GeneExpression_DataType

OSIRIS:ExpressionValue

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS nonEnumerated Float O85 OSIRIS:ExpressionValue GeneExpression Value GeneExpression_Value

OSIRIS:Annotation_FusionPrimeEnd

ValueMeaning LabelValueMeaning Referentiel url TypeConceptualDomain FormatConceptualDomain IdDataElementConcept ConceptualDomain ObjectClass ObjectProperty DataElementConcept
OSIRIS:O93-1 5prime OSIRIS Enumerated String O93 OSIRIS:Annotation_FusionPrimeEnd Annotation FusionPrimeEnd Annotation_FusionPrimeEnd
OSIRIS:O93-2 3prime OSIRIS Enumerated String O93 OSIRIS:Annotation_FusionPrimeEnd Annotation FusionPrimeEnd Annotation_FusionPrimeEnd

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