ConceptualDomain

CLINICAL

HL7 v3 Code System AdministrativeGender

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
M	Male	FHIR (HL7) v3	http://hl7.org/fhir/v3/AdministrativeGender/index.html	HL7 v3 Code System AdministrativeGender	Enumerated	String	C2	Patient	Gender	Sexe	Sexe du patient
F	Female	FHIR (HL7) v3	http://hl7.org/fhir/v3/AdministrativeGender/index.html	HL7 v3 Code System AdministrativeGender	Enumerated	String	C2	Patient	Gender	Sexe	Sexe du patient
UN	Undifferentiated	FHIR (HL7) v3	http://hl7.org/fhir/v3/AdministrativeGender/index.html	HL7 v3 Code System AdministrativeGender	Enumerated	String	C2	Patient	Gender	Sexe	Sexe du patient

HL7 v3 Code System Race

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
1002-5	American Indian or Alaska Native	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
1004-1	American Indian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2028-9	Asian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2029-7	Asian Indian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2030-5	Bangladeshi	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2031-3	Bhutanese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2032-1	Burmese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2033-9	Cambodian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2034-7	Chinese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2035-4	Taiwanese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2036-2	Filipino	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2037-0	Hmong	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2038-8	Indonesian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2039-6	Japanese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2040-4	Korean	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2041-2	Laotian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2042-0	Malaysian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2043-8	Okinawan	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2044-6	Pakistani	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2045-3	Sri Lankan	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2046-1	Thai	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2047-9	Vietnamese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2048-7	Iwo Jiman	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2049-5	Maldivian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2050-3	Nepalese	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2051-1	Singaporean	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2052-9	Madagascar	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2054-5	Black or African American	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2056-0	Black	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2058-6	African American	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2060-2	African	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2067-7	Bahamian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2068-5	Barbadian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2069-3	Dominican	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2070-1	Dominica Islander	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2071-9	Haitian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2072-7	Jamaican	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2073-5	Tobagoan	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2074-3	Trinidadian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2075-0	West Indian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2076-8	Native Hawaiian or Other Pacific Islander	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2078-4	Polynesian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2085-9	Micronesian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2100-6	Melanesian	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2500-7	Other Pacific Islander	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2106-3	White	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2108-9	European	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2118-8	Middle Eastern or North African	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient
2129-5	Arab	FHIR (HL7) v3	https://www.hl7.org/fhir/v3/Race/index.html	HL7 v3 Code System Race	Enumerated	String	C3	Patient	Ethnicity	Ethnicité	Origine ethnique du patient

UMLS:C0007465

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UMLS:C0277589	Death of unknown cause	UMLS	https://uts.nlm.nih.gov/metathesaurus.html#C0277589;0;1;CUI;2016AA;EXACT_MATCH;CUI;*;	UMLS:C0007465	Enumerated	String	C7	Patient	CauseOfDeath	Cause du décès	Descriptif de la cause de décès du patient
UMLS:C1707251	Other cancer	UMLS	https://uts.nlm.nih.gov/metathesaurus.html#C1707251;0;1;CUI;2016AA;EXACT_MATCH;CUI;*;	UMLS:C0007465	Enumerated	String	C7	Patient	CauseOfDeath	Cause du décès	Descriptif de la cause de décès du patient
UMLS:C3262234	Other cause	UMLS	https://uts.nlm.nih.gov/metathesaurus.html#C3262234;0;1;CUI;2016AA;EXACT_MATCH;CUI;*;	UMLS:C0007465	Enumerated	String	C7	Patient	CauseOfDeath	Cause du décès	Descriptif de la cause de décès du patient
UMLS:C0679861	Complications of treatment	UMLS	https://uts.nlm.nih.gov/metathesaurus.html#C0679861;0;1;CUI;2016AA;EXACT_MATCH;CUI;*;	UMLS:C0007465	Enumerated	String	C7	Patient	CauseOfDeath	Cause du décès	Descriptif de la cause de décès du patient
UMLS:C0027651	Neoplasm	UMLS	https://uts.nlm.nih.gov/metathesaurus.html#C0027651;0;1;CUI;2016AA;EXACT_MATCH;CUI;*;	UMLS:C0007465	Enumerated	String	C7	Patient	CauseOfDeath	Cause du décès	Descriptif de la cause de décès du patient

ICD-10

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
ICD-10	cf. ICD-10	ICD-10	http://apps.who.int/classifications/icd10/browse/2016/en	ICD-10	Enumerated	String	C13	RelatedPathology	PathologyCode	Code	Code international de la pathologie associée (hors autre cancer).

CIM-O-3 Topo

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
ICD-O-3-TOPO	cf. ICD-O-3-TOPO	CIM-O-3 Topo	http://codes.iarc.fr/topography	CIM-O-3 Topo	Enumerated	String	C17	CancerHistory	TopographyCode	Code Localisation	Code international de la localisation de l'antécédent carcinologique

CIM-O-3 Morpho

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
ICD-O-3-MORPHO	cf. ICD-O-3-MORPHO	CIM-O-3 Morpho	http://codes.iarc.fr/codegroup/2	CIM-O-3 Morpho	Enumerated	String	C18	CancerHistory	MorphologyCode	Code Morphologie / Lésion	Code international de la lésion / type histologique / morphologie de l'antécédent carcinologique

OSIRIS:CancerHistoryType

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:C19-1	Individual	OSIRIS		OSIRIS:CancerHistoryType	Enumerated	String	C19	CancerHistory	Type	Type	Type d'antécédent (Personnel ou Familial)
OSIRIS:C19-2	Family	OSIRIS		OSIRIS:CancerHistoryType	Enumerated	String	C19	CancerHistory	Type	Type	Type d'antécédent (Personnel ou Familial)

OSIRIS:EventType

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UMLS:C1882062	Neoplasm	UMLS	OSIRIS:EventType	Enumerated	String	C20	TumorPathologyEvent	Type	Type	Le champ 'Type' permet de décrire à la fois l'événement 'Cancer' en tant que maladie globale que les différents événements constituant cette maladie (Tumeur initiale, Récidive locale, Récidive métastatique).
UMLS:C2939419	Secondary Neoplasm	UMLS	OSIRIS:EventType	Enumerated	String	C20	TumorPathologyEvent	Type	Type	Le champ 'Type' permet de décrire à la fois l'événement 'Cancer' en tant que maladie globale que les différents événements constituant cette maladie (Tumeur initiale, Récidive locale, Récidive métastatique).
UMLS:C0521158	Recurrent tumor	UMLS	OSIRIS:EventType	Enumerated	String	C20	TumorPathologyEvent	Type	Type	Le champ 'Type' permet de décrire à la fois l'événement 'Cancer' en tant que maladie globale que les différents événements constituant cette maladie (Tumeur initiale, Récidive locale, Récidive métastatique).
UMLS:C0677930	primary tumor	UMLS	OSIRIS:EventType	Enumerated	String	C20	TumorPathologyEvent	Type	Type	Le champ 'Type' permet de décrire à la fois l'événement 'Cancer' en tant que maladie globale que les différents événements constituant cette maladie (Tumeur initiale, Récidive locale, Récidive métastatique).

OMS

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
0	activité normale sans restriction	OMS	OMS	Enumerated	String	C22	TumorPathologyEvent	PerformanceStatus	Echelle d'autonomie / Performance status	Définition de l'échelle d'autonomie (échelle de Karnofsky ou OMS)
1	restreint pour des activités physiques importantes, mais patient ambulant et capable de fournir un travail léger	OMS	OMS	Enumerated	String	C22	TumorPathologyEvent	PerformanceStatus	Echelle d'autonomie / Performance status	Définition de l'échelle d'autonomie (échelle de Karnofsky ou OMS)
2	ambulant et capable de se prendre en charge, mais incapable de fournir un travail et alité pendant moins de 50 % de son temps	OMS	OMS	Enumerated	String	C22	TumorPathologyEvent	PerformanceStatus	Echelle d'autonomie / Performance status	Définition de l'échelle d'autonomie (échelle de Karnofsky ou OMS)
3	capacité de prise en charge propre beaucoup plus limitée. Passe plus de 50 % de son temps au lit ou dans une chaise.	OMS	OMS	Enumerated	String	C22	TumorPathologyEvent	PerformanceStatus	Echelle d'autonomie / Performance status	Définition de l'échelle d'autonomie (échelle de Karnofsky ou OMS)
4	complètement grabataire. Incapable de se prendre en charge. Le patient reste totalement confiné au lit ou dans une chaise.	OMS	OMS	Enumerated	String	C22	TumorPathologyEvent	PerformanceStatus	Echelle d'autonomie / Performance status	Définition de l'échelle d'autonomie (échelle de Karnofsky ou OMS)

G8

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
				G8	nonEnumerated	Integer	C23	TumorPathologyEvent	G8	Outil de dépistage G8	outil d'évaluation de l'état général des patients âgés ayant un cancer

OSIRIS:T_TNM

ValueMeaning	LabelValueMeaning	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
Tx	Tx	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T0	T0	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T1	T1	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T1a	T1a	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T1b	T1b	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T1c	T1c	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T2	T2	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T3	T3	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T4	T4	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T4a	T4a	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T4b	T4b	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T4c	T4c	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive
T4d	T4d	OSIRIS:T_TNM	Enumerated	String	C24	TumorPathologyEvent	T	T	Taille de la tumeur, propagation sur le site de la tumeur primitive

OSIRIS:N_TNM

ValueMeaning	LabelValueMeaning	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
Nx	Nx	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire
N0	N0	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire
N1mi	N1mi	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire
N1	N1	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire
N2	N2	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire
N3	N3	OSIRIS:N_TNM	Enumerated	String	C25	TumorPathologyEvent	N	N	Propagation au niveau ganglionnaire

OSIRIS:M_TNM

ValueMeaning	LabelValueMeaning	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
Mx	Mx	OSIRIS:M_TNM	Enumerated	String	C26	TumorPathologyEvent	M	M	Propagation à distance, présence de métastases
M0	M0	OSIRIS:M_TNM	Enumerated	String	C26	TumorPathologyEvent	M	M	Propagation à distance, présence de métastases
M1	M1	OSIRIS:M_TNM	Enumerated	String	C26	TumorPathologyEvent	M	M	Propagation à distance, présence de métastases

OSIRIS:TNMVersion

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UICC TNM Classification 7th edition	UICC TNM Classification 7th edition			OSIRIS:TNMVersion	Enumerated	String	C27	TumorPathologyEvent	TNMVersion	Version du TNM	Version de la classification TNM

OSIRIS:TNMType

ValueMeaning	LabelValueMeaning	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
c	Clinique	OSIRIS:TNMType	Enumerated	String	C28	TumorPathologyEvent	TNMType	Type de TNM	Type de TNM (clinique, Pathologique, etc…)
p	Pathologique	OSIRIS:TNMType	Enumerated	String	C28	TumorPathologyEvent	TNMType	Type de TNM	Type de TNM (clinique, Pathologique, etc…)
y	Après traitement neoadjuvant	OSIRIS:TNMType	Enumerated	String	C28	TumorPathologyEvent	TNMType	Type de TNM	Type de TNM (clinique, Pathologique, etc…)
u	Radiologique	OSIRIS:TNMType	Enumerated	String	C28	TumorPathologyEvent	TNMType	Type de TNM	Type de TNM (clinique, Pathologique, etc…)

OSIRIS:Laterality

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UMLS:C0238767	Bilateral	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)
UMLS:C0205091	Left	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)
UMLS:C2939193	Median (qualifier value)	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)
UMLS:C1272460	Not Applicable	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)
UMLS:C0205090	Right	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)
UMLS:C0439673	Unknown	UMLS	OSIRIS:Laterality	Enumerated	String	C36	TumorPathologyEvent	Laterality	Latéralité	Latéralité de la localisation (si elle existe)

OSIRIS:TreatmentType

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UMLS:C3665472	Chemotherapy	UMLS	OSIRIS:TreatmentType	Enumerated	String	C41	Treatment	Type	Type	Type de traitement
UMLS:C0279025	Hormone Therapy	UMLS	OSIRIS:TreatmentType	Enumerated	String	C41	Treatment	Type	Type	Type de traitement
UMLS:C1522449	Therapeutic radiology procedure	UMLS	OSIRIS:TreatmentType	Enumerated	String	C41	Treatment	Type	Type	Type de traitement
UMLS:C0728940	Surgery	UMLS	OSIRIS:TreatmentType	Enumerated	String	C41	Treatment	Type	Type	Type de traitement

CCAM

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
CCAM	cf. CCAM	CCAM	http://www.ameli.fr/accueil-de-la-ccam/index.php	CCAM	Enumerated	String	C42	Treatment	ActivityCode	Acte	Code CCAM de l'acte

OSIRIS:SurgeryResection

ValueMeaning	LabelValueMeaning	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
R0	Marges macroscopiquement et microscopiquement saines	OSIRIS:SurgeryResection	Enumerated	String	C46	Treatment (Type=Surgery)	ResectionQuality	Qualité de la résection (anapath)	Qualité de la résection (anapath)
R1	Marges macroscopiquement saines mais microscopiquement envahies	OSIRIS:SurgeryResection	Enumerated	String	C46	Treatment (Type=Surgery)	ResectionQuality	Qualité de la résection (anapath)	Qualité de la résection (anapath)
R2	Marges macroscopiquement et microscopiquement envahies	OSIRIS:SurgeryResection	Enumerated	String	C46	Treatment (Type=Surgery)	ResectionQuality	Qualité de la résection (anapath)	Qualité de la résection (anapath)

ATC 5e niveau

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
ATC	cf. ATC	ATC 5e niveau		ATC 5e niveau	Enumerated	String	C51	Drug	Code	Code molécule	Code de la classification thérapeutique
ATC	cf. ATC	ATC 5e niveau		ATC 5e niveau	Enumerated	String	C52	Drug	DrugName	Nom de la molécule	Nom de la molécule

MIABIS-39

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
MIABIS-39	cf. MIABIS-39	MIABIS-39	https://github.com/MIABIS/miabis/wiki/Data-describing-Sample	MIABIS-39	nonEnumerated	String	C53	BiologicalSample	SampleId	Id unique de l'échantillon	Identifiant du prélèvement (père) dans le centre

MIABIS-40

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
MIABIS-40	cf. MIABIS-40	MIABIS-40	https://github.com/MIABIS/miabis/wiki/Data-describing-Sample	MIABIS-40	nonEnumerated	String	C54	BiologicalSample	ParentSampleId	Identifiant unique de l'échantillon parent	Identifiant de l'échantillon dérivé (ADN, ARN, protéine,...)

MIABIS-43

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
MIABIS-43	cf. MIABIS-43	MIABIS-43	https://github.com/MIABIS/miabis/wiki/Data-describing-Sample	MIABIS-43	nonEnumerated	Date	C56	BiologicalSample	CollectDate	Date du prélèvement	Date du prélèvement

MIABIS-41

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
MIABIS-41	cf. MIABIS-41	MIABIS-41/MIABIS-2.0-14	https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type	MIABIS-41	Enumerated	String	C58	BiologicalSample	SampleNature	Nature de l'échantillon	La nature du contenu
MIABIS-41	cf. MIABIS-41	MIABIS-41/MIABIS-2.0-14	https://github.com/MIABIS/miabis/wiki/Structured-data-and-lists#material-type	MIABIS-41	Enumerated	String	C59	BiologicalSample	SampleOrigin	Nature du prélèvement (tumoral / sain)	Le type de dérivé

OMIC

OSIRIS:TechnicalProtocol

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O6-1	ChIP-on-Chip	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-2	ChIP-seq	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-3	DNA microarray	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-4	DNA targeted panel sequencing	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-5	Exome sequencing	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-6	Mass spectrometry	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-7	MeDIP-Chip	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-8	MeDIP-seq	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-9	Methylation microarray	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-10	RNA microarray	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-11	RNA targeted panel sequencing	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-12	RNA-seq	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-13	RPPA	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-14	Whole genome bisulfite sequencing	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-15	Whole genome sequencing	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment
OSIRIS:O6-16	miRNA microarray	OSIRIS	OSIRIS:TechnicalProtocol	Enumerated	String	O6	Technology	TechnicalProtocol	TechnicalProtocol	Protocol used for the experiment

OSIRIS:PlatformName

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:PlatformName	Enumerated	String	O7	Technology	PlatformName	PlatformName	Technological platform name (provider followed by the platform name)

OSIRIS:PlatformAccession

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:PlatformAccession	nonEnumerated	String	O8	Technology	PlatformAccession	PlatformAccession	GEO Identifier of the platform

OSIRIS:DateOfExperiment

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:DateOfExperiment	nonEnumerated	Date	O9	Technology	DateOfExperiment	DateOfExperiment	Date when the experiment was performed

OSIRIS:PanelName

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O10-0	Not applicable	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-1	Ion AmpliSeq Cancer Hotspot Panel v2	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-2	Ion AmpliSeq Colon and Lung Cancer Research Panel v2	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-3	Ion AmpliSeq Comprehensive Cancer Panel	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-4	Ion AmpliSeq Oncomine Comprehensive Assay	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-5	Ion AmpliSeq Oncomine Focus Assay	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-6	Ion AmpliSeq TP53 Research Panel	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-7	Lyric: Ion AmpliSeq Profiler	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-8	QIAGEN GeneRead DNAseq Targeted Panels V2	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)
OSIRIS:O10-9	SAFIR02 Panel	OSIRIS	OSIRIS:PanelName	Enumerated	String	O10	Panel	PanelName	PanelName	Name of the panel targeted by the experimental analysis (provider + name)

OSIRIS:AnalyticPipelineCode

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:AnalyticPipelineCode	nonEnumerated	String	O11	Analysis	AnalyticPipelineCode	AnalyticPipelineCode	Identifier of the pipeline used into the analysis (unique in the center)

OSIRIS:AlgorithmicCellularity

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:AlgorithmicCellularity	nonEnumerated	Integer	O12	Experiment on specimen	AlgorithmicCellularity	AlgorithmicCellularity	Calculated percentage of tumor cells in sample

OSIRIS:AlgorithmicPloïdy

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O13-1	Haploid	OSIRIS	OSIRIS:AlgorithmicPloïdy	Enumerated	String	O13	Experiment on specimen	AlgorithmicPloïdy	AlgorithmicPloïdy	Calculated number of sets of chromosomes in a cell of the sample
OSIRIS:O13-2	Diploid	OSIRIS	OSIRIS:AlgorithmicPloïdy	Enumerated	String	O13	Experiment on specimen	AlgorithmicPloïdy	AlgorithmicPloïdy	Calculated number of sets of chromosomes in a cell of the sample
OSIRIS:O13-3	Triploid	OSIRIS	OSIRIS:AlgorithmicPloïdy	Enumerated	String	O13	Experiment on specimen	AlgorithmicPloïdy	AlgorithmicPloïdy	Calculated number of sets of chromosomes in a cell of the sample
OSIRIS:O13-4	Tetraploid	OSIRIS	OSIRIS:AlgorithmicPloïdy	Enumerated	String	O13	Experiment on specimen	AlgorithmicPloïdy	AlgorithmicPloïdy	Calculated number of sets of chromosomes in a cell of the sample
OSIRIS:O13-0	Not available	OSIRIS	OSIRIS:AlgorithmicPloïdy	Enumerated	String	O13	Experiment on specimen	AlgorithmicPloïdy	AlgorithmicPloïdy	Calculated number of sets of chromosomes in a cell of the sample

OSIRIS:NumberOfBreakPoints

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:NumberOfBreakPoints	nonEnumerated	Integer	O14	Experiment on specimen/CpyNb Quality filter	NumberOfBreakPoints	NumberOfBreakPoints	Calculated number of break points in genomic profile

OSIRIS:AlterationType

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O15-1	Gene expression	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-2	Protein expression	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-3	Fusion	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-4	Copy number variation	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-5	Genetic variant	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-6	Structural alteration	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-7	Transcription factor	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-8	Histone marks	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-9	Transcript isoform	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)
OSIRIS:O15-10	Viral insertion site	OSIRIS	OSIRIS:AlterationType	Enumerated	String	O15	Alteration	AlterationType	AlterationType	General type of the detected genetic alteration (high level type)

OSIRIS:ValidationType

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O15-11	Experimental	OSIRIS	OSIRIS:ValidationType	Enumerated	String	O16	Alteration	ValidationType	ValidationType	Type of validation of the detected alteration
OSIRIS:O15-12	By biologist	OSIRIS	OSIRIS:ValidationType	Enumerated	String	O16	Alteration	ValidationType	ValidationType	Type of validation of the detected alteration
OSIRIS:O15-13	In silico	OSIRIS	OSIRIS:ValidationType	Enumerated	String	O16	Alteration	ValidationType	ValidationType	Type of validation of the detected alteration

OSIRIS:ValidationMethod

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:ValidationMethod	nonEnumerated	String	O17	Validation	ValidationMethod	ValidationMethod	Validation method depending on the type of validation

OSIRIS:ValidationStatus

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O18-1	Not Validated	OSIRIS		OSIRIS:ValidationStatus	Enumerated	String	O18	Validation	ValidationStatus	ValidationStatus	Validation status of the detected alteration
OSIRIS:O18-2	Validated	OSIRIS		OSIRIS:ValidationStatus	Enumerated	String	O18	Validation	ValidationStatus	ValidationStatus	Validation status of the detected alteration

OSIRIS:Chromosome

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA21254-0	chr1	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21255-7	chr2	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21256-5	chr3	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21257-3	chr4	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21258-1	chr5	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21259-9	chr6	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21260-7	chr7	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21261-5	chr8	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21262-3	chr9	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21263-1	chr10	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21264-9	chr11	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21265-6	chr12	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21266-4	chr13	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21267-2	chr14	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21268-0	chr15	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21269-8	chr16	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21270-6	chr17	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21271-4	chr18	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21272-2	chr19	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21273-0	chr20	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21274-8	chr21	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21275-5	chr22	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21276-3	chrX	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
LA21277-1	chrY	OSIRIS	http://r.details.loinc.org/AnswerList/LL2938-0.html	OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
OSIRIS:O19-1	MT	OSIRIS		OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
OSIRIS:O19-2	viral	OSIRIS		OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding
OSIRIS:O19-3	bacterial	OSIRIS		OSIRIS:Chromosome	Enumerated	String	O19	Alteration	Chromosome	Chromosome	Chromosome containing the genetic finding

FHIR:extension-geneticsGenomicStart

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR (HL7)	http://hl7.org/fhir/extension-geneticsgenomicstart.html	FHIR:extension-geneticsGenomicStart	nonEnumerated	Integer	O20	Alteration	GenomicStart	GenomicStart	Nucleotide location for start of genomic finding on the positive (+) genomics strand, 1-based

FHIR:extension-geneticsGenomicStop

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR (HL7)	http://hl7.org/fhir/extension-geneticsgenomicstop.html	FHIR:extension-geneticsGenomicStop	nonEnumerated	Integer	O21	Alteration	GenomicStop	GenomicStop	Exclusive 0-based nucleotide position for end of genomic finding on the positive (+) genomic strand. <===> Nucleotide location for end of genomic finding on the positive (+) genomic strand, 1-based

FHIR:extension-geneticsGenomeBuild

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O22-1	GRCh37	FHIR (HL7)	https://www.hl7.org/fhir/extension-geneticsgenomebuild.html	FHIR:extension-geneticsGenomeBuild	Enumerated	String	O22	Alteration	GenomeBuild	GenomeBuild	Genome Build used for reference
OSIRIS:O22-2	GRCh38	FHIR (HL7)	https://www.hl7.org/fhir/extension-geneticsgenomebuild.html	FHIR:extension-geneticsGenomeBuild	Enumerated	String	O22	Alteration	GenomeBuild	GenomeBuild	Genome Build used for reference

UCSC

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
UCSC cytoband	UCSC cytoband	UCSC	http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/cytoBand.txt.gz	UCSC	nonEnumerated	String	O23	Alteration	Cytoband	Cytoband	Cytogenetic location

OSIRIS:GenomeEntityType

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O24-1	gene	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...
OSIRIS:O24-2	miRNA	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...
OSIRIS:O24-3	piRNA	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...
OSIRIS:O24-4	mRNA	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...
OSIRIS:O24-5	ncRNA	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...
OSIRIS:O24-6	ORF	OSIRIS	OSIRIS:GenomeEntityType	Enumerated	String	O24	Genome entity	GenomeEntityType	GenomeEntityType	Type of the genome entity. For eg: gene, mRNA, ncRNA...

OSIRIS:GenomeEntityDatabase

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O25-1	HGNC	OSIRIS	OSIRIS:GenomeEntityDatabase	Enumerated	String	O25	Genome entity	GenomeEntityDatabase	GenomeEntityDatabase	Database of the genome entity
OSIRIS:O25-2	miRDB	OSIRIS	OSIRIS:GenomeEntityDatabase	Enumerated	String	O25	Genome entity	GenomeEntityDatabase	GenomeEntityDatabase	Database of the genome entity
OSIRIS:O25-3	Entrez	OSIRIS	OSIRIS:GenomeEntityDatabase	Enumerated	String	O25	Genome entity	GenomeEntityDatabase	GenomeEntityDatabase	Database of the genome entity

FHIR:extension-observation-geneticsGene

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticsgene.html	FHIR:extension-observation-geneticsGene	nonEnumerated	String	O26	Genome entity	GenomeEntityId	GenomeEntityId	Identifier of the genome entity in the genome entity database

LOINC:48018-6

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
HGNC ID	HGNC Approved Symbol	LOINC	http://www.genenames.org/	LOINC:48018-6	nonEnumerated	String	O27	Genome entity	GeneSymbol	GeneSymbol	Hugo gene symbol

OSIRIS:FusionType

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA26331-1	translocation	LOINC	http://r.details.loinc.org/LOINC/81289-1.html	OSIRIS:FusionType	Enumerated	String	O28	Fusion	FusionType	FusionType	Type of the fusion event. For eg: translocation, readthrough
OSIRIS:O28-1	readthrough	OSIRIS		OSIRIS:FusionType	Enumerated	String	O28	Fusion	FusionType	FusionType	Type of the fusion event. For eg: translocation, readthrough

OSIRIS:FusionTranscript

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionTranscript	nonEnumerated	Boolean	O29	Fusion	FusionTranscript	FusionTranscript	Have been found from a fusion transcript ?

OSIRIS:FusionTranscriptReference

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionTranscriptReference	nonEnumerated	String	O30	Fusion	FusionTranscriptReference	FusionTranscriptReference	Accession number of observed fusion

FHIR:extension-observation-geneticsDNARegionName

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticsdnaregionname.html	FHIR:extension-observation-geneticsDNARegionName	nonEnumerated	String	O32	Fusion	FusionRegionName5prime	FusionRegionName5prime	Human readable name for the region of interest from the 5 prime fusion partner. For eg : Exon, Intron

FHIR:extension-observation-geneticsTranscriptReferenceSequenceId

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticstranscriptreferencesequenceid.html	FHIR:extension-observation-geneticsTranscriptReferenceSequenceId	nonEnumerated	String	O33	Fusion	FusionTranscriptReferenceSequenceId5prime	FusionTranscriptReferenceSequenceId5prime	Reference identifier for cDNA transcript of the 5 prime fusion partner, with version, from NCBI's RefSeq or ENSEMBL.

OSIRIS:FusionStrand5prime

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionStrand5prime	nonEnumerated	String	O34	Fusion	FusionStrand5prime	FusionStrand5prime	Strand of the 5 prime fusion partner

OSIRIS:FusionPoint5prime

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionPoint5prime	nonEnumerated	String	O35	Fusion	FusionPoint5prime	FusionPoint5prime	Position of the fusion point on the 5 prime partner

OSIRIS:FusionStrand3prime

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionStrand3prime	nonEnumerated	String	O39	Fusion	FusionStrand3prime	FusionStrand3prime	Strand of the 3 prime fusion partner

OSIRIS:FusionPoint3prime

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionPoint3prime	nonEnumerated	Integer	O40	Fusion	FusionPoint3prime	FusionPoint3prime	Position of the fusion point on the 3 prime partner

OSIRIS:FusionInFrame

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionInFrame	nonEnumerated	Boolean	O41	Fusion	FusionInFrame	FusionInFrame	Specify whether the fusion is in frame

OSIRIS:FusionAnnotationReferentiel

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O42-1	ChimerDb	OSIRIS	OSIRIS:FusionAnnotationReferentiel	Enumerated	String	O42	Fusion Analysis	FusionAnnotationReferentiel	FusionAnnotationReferentiel	Reference database to annotate the fusion
OSIRIS:O42-2	Oncofuse	OSIRIS	OSIRIS:FusionAnnotationReferentiel	Enumerated	String	O42	Fusion Analysis	FusionAnnotationReferentiel	FusionAnnotationReferentiel	Reference database to annotate the fusion
OSIRIS:O42-3	Mittelman DB	OSIRIS	OSIRIS:FusionAnnotationReferentiel	Enumerated	String	O42	Fusion Analysis	FusionAnnotationReferentiel	FusionAnnotationReferentiel	Reference database to annotate the fusion

OSIRIS:FusionAnnotationValue

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionAnnotationValue	nonEnumerated	String	O43	Fusion Analysis	FusionAnnotationValue	FusionAnnotationValue	Annotation of the fusion

OSIRIS:FusionNbSpanningPair

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionNbSpanningPair	nonEnumerated	Integer	O44	Fusion/QualityFilter	FusionNbSpanningPair	FusionNbSpanningPair	Number of reads pairs spanning the fusion

OSIRIS:FusionNbSplitReads

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:FusionNbSplitReads	nonEnumerated	Integer	O46	Fusion/QualityFilter	FusionNbSplitReads	FusionNbSplitReads	Number of reads containing the fusion point

OSIRIS:SegmentIntensity

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:SegmentIntensity	nonEnumerated	Float	O47	Segment copy number	SegmentIntensity	SegmentIntensity	Intensity of the measured signal

OSIRIS:SegmentGenomicStatus

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O49-1	Amplification	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-2	Gain	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-3	Normal	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-4	Heretozygous deletion	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-5	Homozygous deletion	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-6	Copy neutral	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status
OSIRIS:O49-7	Isodisomy	OSIRIS	OSIRIS:SegmentGenomicStatus	Enumerated	String	O49	Segment copy number	SegmentGenomicStatus	SegmentGenomicStatus	Copy number status

OSIRIS:CopyNumber

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:CopyNumber	nonEnumerated	Integer	O50	Segment copy number	CopyNumber	CopyNumber	Estimated DNA copy number

OSIRIS:LossOfHeterozygosity

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:LossOfHeterozygosity	nonEnumerated	Boolean	O51	Segment LOH	LossOfHeterozygosity	LossOfHeterozygosity	Is the segment located in a region of loss of heterozygosity ? (can be independant from copy number information

FHIR:Sequence.referenceAllele

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	https://www.hl7.org/fhir/2016Jan/sequence-definitions.html#Sequence.referenceAllele	FHIR:Sequence.referenceAllele	nonEnumerated	String	O53	Reference variant	ReferenceAllele	ReferenceAllele	Plus strand reference allele at this position. Include the sequence deleted for a deletion, or '-' for an insertion.

FHIR:Sequence.observedAllele

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	https://www.hl7.org/fhir/2016Jan/sequence-definitions.html#Sequence.observedAllele	FHIR:Sequence.observedAllele	nonEnumerated	String	O54	Reference variant	AlternativeAllele	AlternativeAllele	Plus strand observed alternative allele at this position. Include the sequence inserted for a insertion, or '-' for a deletion.

LOINC:48019-4

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA6692-3	Deletion	LOINC	http://r.details.loinc.org/LOINC/48019-4.html	LOINC:48019-4	Enumerated	String	O55	Reference variant	DNASequenceVariationType	DNASequenceVariationType	Codified type of the DNA sequence variation
LA6686-5	Duplication	LOINC	http://r.details.loinc.org/LOINC/48019-4.html	LOINC:48019-4	Enumerated	String	O55	Reference variant	DNASequenceVariationType	DNASequenceVariationType	Codified type of the DNA sequence variation
LA6687-3	Insertion	LOINC	http://r.details.loinc.org/LOINC/48019-4.html	LOINC:48019-4	Enumerated	String	O55	Reference variant	DNASequenceVariationType	DNASequenceVariationType	Codified type of the DNA sequence variation
LA6689-9	Inversion	LOINC	http://r.details.loinc.org/LOINC/48019-4.html	LOINC:48019-4	Enumerated	String	O55	Reference variant	DNASequenceVariationType	DNASequenceVariationType	Codified type of the DNA sequence variation
LA6690-7	Substitution	LOINC	http://r.details.loinc.org/LOINC/48019-4.html	LOINC:48019-4	Enumerated	String	O55	Reference variant	DNASequenceVariationType	DNASequenceVariationType	Codified type of the DNA sequence variation

OSIRIS:VariationDatabase

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:VariationDatabase	Enumerated	String	O56	Reference variant	VariationDatabase	VariationDatabase	Name of the variation database

OSIRIS:VariationId

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:VariationId	nonEnumerated	String	O57	Reference variant	VariationId	VariationId	Identifier for variant in the variation database

OSIRIS:PfamDomain

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:PfamDomain	nonEnumerated	String	O58	Reference variant	PfamDomain	PfamDomain	Pfams domains related to alteration position

OSIRIS:PfamId

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:PfamId	nonEnumerated	String	O59	Reference variant	PfamId	PfamId	Identifier of Pfams domains related to alteration position

OSIRIS:MutationPredictionAlgorithm

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O63-1	SIFT	OSIRIS		OSIRIS:MutationPredictionAlgorithm	Enumerated	String	O63	Reference variant	MutationPredictionAlgorithm	MutationPredictionAlgorithm	Algorithm to predict the variation effect over the protein
OSIRIS:O63-2	POLYPHEN2_HDIV	OSIRIS		OSIRIS:MutationPredictionAlgorithm	Enumerated	String	O63	Reference variant	MutationPredictionAlgorithm	MutationPredictionAlgorithm	Algorithm to predict the variation effect over the protein

OSIRIS:MutationPredictionValue

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:MutationPredictionValue	nonEnumerated	String	O64	Reference variant	MutationPredictionValue	MutationPredictionValue	Prediction of the variation effect over the protein

OSIRIS:MutationPredictionScore

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:MutationPredictionScore	nonEnumerated	Float	O65	Reference variant	MutationPredictionScore	MutationPredictionScore	Level of confidence of the prediction of the variation effect over the protein

OSIRIS:ProteinReferenceDatabase

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O67-1	RefSeq	OSIRIS	OSIRIS:ProteinReferenceDatabase	Enumerated	String	O67	Protein	ProteinReferenceDatabase	ProteinReferenceDatabase	Name of the protein reference database
OSIRIS:O67-2	SwissProt	OSIRIS	OSIRIS:ProteinReferenceDatabase	Enumerated	String	O67	Protein	ProteinReferenceDatabase	ProteinReferenceDatabase	Name of the protein reference database
OSIRIS:O67-3	UniProt	OSIRIS	OSIRIS:ProteinReferenceDatabase	Enumerated	String	O67	Protein	ProteinReferenceDatabase	ProteinReferenceDatabase	Name of the protein reference database

FHIR:extension-observation-geneticsProteinReferenceSequenceId

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticsproteinreferencesequenceid.html	FHIR:extension-observation-geneticsProteinReferenceSequenceId	nonEnumerated	String	O68	Protein	ProteinReferenceSequenceId	ProteinReferenceSequenceId	Reference identifier of the protein transcript

OSIRIS:TranscriptReferenceDatabase

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O69-1	RefSeq	OSIRIS		OSIRIS:TranscriptReferenceDatabase	Enumerated	String	O69	Exonic variant	TranscriptReferenceDatabase	TranscriptReferenceDatabase	Name of the sequence reference database
OSIRIS:O69-2	Ensembl	OSIRIS		OSIRIS:TranscriptReferenceDatabase	Enumerated	String	O69	Exonic variant	TranscriptReferenceDatabase	TranscriptReferenceDatabase	Name of the sequence reference database

FHIR:extension-observation-geneticsDNASequenceVariation

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticsdnasequencevariation.html	FHIR:extension-observation-geneticsDNASequenceVariation	nonEnumerated	String	O71	Exonic variant	DNASequenceVariation	DNASequenceVariation	HGVS nomenclature on the chosen transcript

FHIR:extension-observation-geneticsAminoAcidChange

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		FHIR	http://hl7.org/fhir/2016May/extension-observation-geneticsaminoacidchange.html	FHIR:extension-observation-geneticsAminoAcidChange	nonEnumerated	String	O72	Exonic variant	AminoAcidChange	AminoAcidChange	HGVS nomenclature on the chosen protein transcript

OSIRIS:GenomicSequenceVariation

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:GenomicSequenceVariation	nonEnumerated	String	O73	Exonic variant	GenomicSequenceVariation	GenomicSequenceVariation	HGVS nomenclature on the given GenomeReferenceSequenceId.

OSIRIS:RNASequenceVariation

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:RNASequenceVariation	nonEnumerated	String	O74	Exonic variant	RNASequenceVariation	RNASequenceVariation	HGVS nomenclature on the given TranscriptReferenceSequenceId and experimentely observed on RNA.

OSIRIS:AminoAcidChangeType

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA6692-3	Deletion	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6686-5	Duplication	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6694-9	Frameshift	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6695-6	Initiating Methionine	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6687-3	Insertion	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA9659-9	Insertion and Deletion	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6698-0	Missense	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6699-8	Nonsense	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6700-4	Silent	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
LA6701-2	Stop Codon Mutation	LOINC	http://r.details.loinc.org/LOINC/48006-1.html	OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level
OSIRIS:O75-1	In frame	OSIRIS		OSIRIS:AminoAcidChangeType	Enumerated	String	O75	Exonic variant	AminoAcidChangeType	AminoAcidChangeType	HGVS nomenclature of changes at protein-level

OSIRIS:PositionCoverage

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:PositionCoverage	nonEnumerated	Integer	O76	Variant in specimen	PositionCoverage	PositionCoverage	Total coverage at the variant position observed in the specimen

OSIRIS:VariantCoverage

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:VariantCoverage	nonEnumerated	Integer	O77	Variant in specimen	VariantCoverage	VariantCoverage	Coverage of the alternative allele at the variant position observed in the specimen

OSIRIS:StrandBias

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:StrandBias	nonEnumerated	Boolean	O78	Variant in specimen	StrandBias	StrandBias	Indication of the existence of strand bias at the variant position

LOINC:LL378-1

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA6683-2	Germline	LOINC	http://s.details.loinc.org/LOINC/48002-0.html	LOINC:LL378-1	Enumerated	String	O79	Variant in specimen	GenomicSourceClass	GenomicSourceClass	Genomic class of the variant (eg: germline, somatic, and prenatal)
LA6684-0	Somatic	LOINC	http://s.details.loinc.org/LOINC/48002-0.html	LOINC:LL378-1	Enumerated	String	O79	Variant in specimen	GenomicSourceClass	GenomicSourceClass	Genomic class of the variant (eg: germline, somatic, and prenatal)
LA10429-1	Prenatal	LOINC	http://s.details.loinc.org/LOINC/48002-0.html	LOINC:LL378-1	Enumerated	String	O79	Variant in specimen	GenomicSourceClass	GenomicSourceClass	Genomic class of the variant (eg: germline, somatic, and prenatal)
LA18197-6	Unknown genomic origin	LOINC	http://s.details.loinc.org/LOINC/48002-0.html	LOINC:LL378-1	Enumerated	String	O79	Variant in specimen	GenomicSourceClass	GenomicSourceClass	Genomic class of the variant (eg: germline, somatic, and prenatal)

LOINC:LL381-5

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
LA6703-8	Heteroplasmic	LOINC	http://s.details.loinc.org/LOINC/53034-5.html	LOINC:LL381-5	Enumerated	String	O80	Variant in specimen	AllelicState	AllelicState	Level of allelic occurrence of a DNA Sequence Variation
LA6704-6	Homoplasmic	LOINC	http://s.details.loinc.org/LOINC/53034-5.html	LOINC:LL381-5	Enumerated	String	O80	Variant in specimen	AllelicState	AllelicState	Level of allelic occurrence of a DNA Sequence Variation
LA6705-3	Homozygous	LOINC	http://s.details.loinc.org/LOINC/53034-5.html	LOINC:LL381-5	Enumerated	String	O80	Variant in specimen	AllelicState	AllelicState	Level of allelic occurrence of a DNA Sequence Variation
LA6706-1	Heterozygous	LOINC	http://s.details.loinc.org/LOINC/53034-5.html	LOINC:LL381-5	Enumerated	String	O80	Variant in specimen	AllelicState	AllelicState	Level of allelic occurrence of a DNA Sequence Variation
LA6707-9	Hemizygous	LOINC	http://s.details.loinc.org/LOINC/53034-5.html	LOINC:LL381-5	Enumerated	String	O80	Variant in specimen	AllelicState	AllelicState	Level of allelic occurrence of a DNA Sequence Variation

ACMG

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O81-1	Pathogenic	ACMG	ACMG	Enumerated	String	O81	Variant in specimen	MolecularTumorBoardConclusion	MolecularTumorBoardConclusion	Conclusion of the biologist on the pathogenicity of the variant before the Molecular Tumor Board
OSIRIS:O81-2	Likely pathogenic	ACMG	ACMG	Enumerated	String	O81	Variant in specimen	MolecularTumorBoardConclusion	MolecularTumorBoardConclusion	Conclusion of the biologist on the pathogenicity of the variant before the Molecular Tumor Board
OSIRIS:O81-3	Benign	ACMG	ACMG	Enumerated	String	O81	Variant in specimen	MolecularTumorBoardConclusion	MolecularTumorBoardConclusion	Conclusion of the biologist on the pathogenicity of the variant before the Molecular Tumor Board
OSIRIS:O81-4	Likely benign	ACMG	ACMG	Enumerated	String	O81	Variant in specimen	MolecularTumorBoardConclusion	MolecularTumorBoardConclusion	Conclusion of the biologist on the pathogenicity of the variant before the Molecular Tumor Board
OSIRIS:O81-5	Uncertain significance	ACMG	ACMG	Enumerated	String	O81	Variant in specimen	MolecularTumorBoardConclusion	MolecularTumorBoardConclusion	Conclusion of the biologist on the pathogenicity of the variant before the Molecular Tumor Board

OBI

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O82-1	Actionable	OSIRIS	OBI	Enumerated	String	O82	Variant in specimen	ClinicalTumorBoardConclusion	ClinicalTumorBoardConclusion	Conclusion of the clinicians wether the variant is actionable or not during the Molecular Tumor Board
OSIRIS:O82-2	Non actionable	OSIRIS	OBI	Enumerated	String	O82	Variant in specimen	ClinicalTumorBoardConclusion	ClinicalTumorBoardConclusion	Conclusion of the clinicians wether the variant is actionable or not during the Molecular Tumor Board
		OSIRIS	OBI	nonEnumerated	Boolean	O83	Variant in specimen	ProposedForOrientation	ProposedForOrientation	Is the ClinicalTumorBoardConclusion used to orient the treatment decision ?

OSIRIS:ExpressionDataType

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
OSIRIS:O84-1	RawExpression	OSIRIS		OSIRIS:ExpressionDataType	Enumerated	String	O84	Gene expression	ExpressionDataType	ExpressionDataType	Type of the expression value corresponding to the level of data processing
OSIRIS:O84-2	NormalizedExpression	OSIRIS		OSIRIS:ExpressionDataType	Enumerated	String	O84	Gene expression	ExpressionDataType	ExpressionDataType	Type of the expression value corresponding to the level of data processing

OSIRIS:ExpressionValue

ValueMeaning	LabelValueMeaning	Referentiel	url	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS		OSIRIS:ExpressionValue	nonEnumerated	Float	O85	Gene expression	ExpressionValue	ExpressionValue	Numerical value for expression

OSIRIS:ExpressionPvalueAdjustmentMethod

ValueMeaning	LabelValueMeaning	Referentiel	ConceptualDomain	TypeConceptualDomain	FormatConceptualDomain	IdDataElementConcept	ObjectClass	ObjectProperty	DataElementConcept	DefDataElementConcept
		OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	nonEnumerated	Float	O86	Gene expression	ExpressionPvalue	ExpressionPvalue	p-value of the dataset comparison through a statistical method
OSIRIS:O87-0	no correction	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-1	bonferroni	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-2	holm	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-3	hochberg	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-4	hommel	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-5	BY	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-6	BH	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel
OSIRIS:O87-7	fdr	OSIRIS	OSIRIS:ExpressionPvalueAdjustmentMethod	Enumerated	String	O87	Gene expression	ExpressionPvalueAdjustmentMethod	ExpressionPvalueAdjustmentMethod	Method used to adjust the nominal value of the p-value when multiple tests are performed in parallel