Merge pull request #42 from JuliaHCI/ml/orient

.github/workflows/CompatHelper.yml

@@ -13,4 +13,3 @@ jobs:
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
           COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }}
-

.github/workflows/ci.yml

@@ -1,11 +1,15 @@
 name: CI
-
 on:
   push:
-    branches: [master]
+    branches: [main]
     tags: ["*"]
   pull_request:
-
+    branches: [main]
+concurrency:
+  # Skip intermediate builds: always.
+  # Cancel intermediate builds: only if it is a pull request build.
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }}
 jobs:
   test:
     name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }}
@@ -14,7 +18,7 @@ jobs:
       fail-fast: false
       matrix:
         version:
-          - "1.3"
+          - "1.5"
           - "1"
           - "nightly"
         os:
@@ -29,24 +33,25 @@ jobs:
         with:
           version: ${{ matrix.version }}
           arch: ${{ matrix.arch }}
-      - name: Cache artifacts
-        uses: actions/cache@v1
-        env:
-          cache-name: cache-artifacts
-        with:
-          path: ~/.julia/artifacts
-          key: ${{ runner.os }}-test-${{ env.cache-name }}-${{ hashFiles('**/Project.toml') }}
-          restore-keys: |
-            ${{ runner.os }}-test-${{ env.cache-name }}-
-            ${{ runner.os }}-test-
-            ${{ runner.os }}-
-      - uses: julia-actions/julia-buildpkg@latest
-      - uses: julia-actions/julia-runtest@latest
+      - uses: julia-actions/cache@v1
+      - uses: julia-actions/julia-buildpkg@v1
+      - uses: julia-actions/julia-runtest@v1
       - uses: julia-actions/julia-processcoverage@v1
       - uses: codecov/codecov-action@v1
         with:
           file: ./lcov.info
           flags: unittests
+  aqua:
+    name: Aqua tests
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v2
+      - uses: julia-actions/setup-julia@v1
+        with:
+          version: '1'
+      - uses: julia-actions/julia-buildpkg@v1
+      - run: julia -e 'using Pkg; Pkg.add("Aqua")'
+      - run: julia --project=@. -e 'using Aqua, HCIToolbox; Aqua.test_all(HCIToolbox, ambiguities=false)'
   docs:
     name: Documentation
     runs-on: ubuntu-latest

.github/workflows/preview-cleanup.yml

@@ -0,0 +1,28 @@
+name: Doc Preview Cleanup
+
+on:
+  pull_request:
+    types: [closed]
+
+jobs:
+  doc-preview-cleanup:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout gh-pages branch
+        uses: actions/checkout@v2
+        with:
+          ref: gh-pages
+
+      - name: Delete preview and history
+        run: |
+            git config user.name "Documenter.jl"
+            git config user.email "[email protected]"
+            git rm -rf "previews/PR$PRNUM"
+            git commit -m "delete preview"
+            git branch gh-pages-new $(echo "delete history" | git commit-tree HEAD^{tree})
+        env:
+            PRNUM: ${{ github.event.number }}
+
+      - name: Push changes
+        run: |
+            git push --force origin gh-pages-new:gh-pages

Project.toml

@@ -1,39 +1,27 @@
 name = "HCIToolbox"
 uuid = "b6cd55e5-4d02-4e12-b82c-005f67e784bf"
 authors = ["Miles Lucas <[email protected]>"]
-version = "0.5.5"
+version = "0.6.0"
 
 [deps]
-Compat = "34da2185-b29b-5c13-b0c7-acf172513d20"
 CoordinateTransformations = "150eb455-5306-5404-9cee-2592286d6298"
-Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
 FillArrays = "1a297f60-69ca-5386-bcde-b61e274b549b"
-ImageFiltering = "6a3955dd-da59-5b1f-98d4-e7296123deb5"
 ImageTransformations = "02fcd773-0e25-5acc-982a-7f6622650795"
 Interpolations = "a98d9a8b-a2ab-59e6-89dd-64a1c18fca59"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-PSFModels = "9ba017d1-7760-46cd-84a3-1e79e9ae9ddc"
 PaddedViews = "5432bcbf-9aad-5242-b902-cca2824c8663"
-Photometry = "af68cb61-81ac-52ed-8703-edc140936be4"
 Rotations = "6038ab10-8711-5258-84ad-4b1120ba62dc"
 SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
 StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
 Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
-StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
 
 [compat]
-Compat = "2.2, 3.8"
 CoordinateTransformations = "0.5, 0.6"
-Distributions = "0.22, 0.23, 0.24"
-FillArrays = "0.6, 0.7, 0.8, 0.9, 0.10, 0.11"
-ImageFiltering = "0.6"
-ImageTransformations = "0.8"
+FillArrays = "0.6, 0.7, 0.8, 0.9, 0.10, 0.11, 0.12"
+ImageTransformations = "0.9"
 Interpolations = "0.12, 0.13"
-PSFModels = "0.1"
 PaddedViews = "0.5"
-Photometry = "0.7"
 Rotations = "1"
 SpecialFunctions = "0.10, 1, 2"
-StaticArrays = "0.12, 1.0"
-StatsBase = "0.32, 0.33"
-julia = "1.3"
+StaticArrays = "0.12, 1"
+julia = "1.5"

README.md

@@ -1,8 +1,8 @@
 # HCIToolbox.jl
 
-[![Build Status](https://github.com/juliahci/HCIToolbox.jl/workflows/CI/badge.svg?branch=master)](https://github.com/juliahci/HCIToolbox.jl/actions)
+[![Build Status](https://github.com/juliahci/HCIToolbox.jl/workflows/CI/badge.svg?branch=main)](https://github.com/juliahci/HCIToolbox.jl/actions)
 [![PkgEval](https://juliaci.github.io/NanosoldierReports/pkgeval_badges/H/HCIToolbox.svg)](https://juliaci.github.io/NanosoldierReports/pkgeval_badges/report.html)
-[![Coverage](https://codecov.io/gh/juliahci/HCIToolbox.jl/branch/master/graph/badge.svg)](https://codecov.io/gh/juliahci/HCIToolbox.jl)
+[![Coverage](https://codecov.io/gh/juliahci/HCIToolbox.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/juliahci/HCIToolbox.jl)
 [![License](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
 
 [![Stable](https://img.shields.io/badge/docs-stable-blue.svg)](https://juliahci.github.io/HCIToolbox.jl/stable)