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1. CEE6720_BIO6720 CEE6720_BIO6720 Public

   Course exercises for CEE/BIO6720.

   1

2. 00_in-situ_GeneCoverage 00_in-situ_GeneCoverage Public

   Forked from rotheconrad/00_in-situ_GeneCoverage

   Workflow to calculate ANIr and sequence coverage (depth and breadth) of genome(s) / MAG(s) from metagenomes by gene, intergenic region, contig, and whole genome.

   Python

3. genome_diversity_pipeline genome_diversity_pipeline Public

   Forked from lmrodriguezr/genome_diversity_pipeline

   Shell

4. SourceApp SourceApp Public

   SourceApp: metagenomic source apportioning of fecal contamination in the water environment

   Python 1

5. jianshu93/metaT_directionality_check jianshu93/metaT_directionality_check Public

   comparison of methods to check DNA contamination during RNA sequencing (or metatranscriptomic sequencing)

   Shell 1

6. rotheconrad/Kraken-Bracken-plot rotheconrad/Kraken-Bracken-plot Public

   Creates stacked bar plots from Kracken and Bracken output.

   Python 3