Code

Support BinaryCIF file format#531

Code

Merged

padix-key merged 14 commits intobiotite-dev:masterbiotite-dev/biotite:masterfrom padix-key:bcifpadix-key/biotite:bcifCopy head branch name to clipboardMar 1, 2024

+27,058-15,661

Commits

Commits on Feb 29, 2024

• Move PDBxFile into cif.py

  padix-key

  committed
  64e02be

  Copy full SHA for 64e02be

• Deprecate MMTFFile

  padix-key

  committed
  4d75a52

  Copy full SHA for 4d75a52

• Fix typo

  padix-key

  committed
  2abf5d5

  Copy full SHA for 2abf5d5

Commits on Mar 1, 2024

• Add interface for BinaryCIF files

  padix-key

  committed
  ff0cac3

  Copy full SHA for ff0cac3

• Support download of bcif files

  padix-key

  committed
  22822d8

  Copy full SHA for 22822d8

• Deprecate NPZ format

  padix-key

  committed
  5329ba4

  Copy full SHA for 5329ba4

• Update test structures

  padix-key

  committed
  5ee36a3

  Copy full SHA for 5ee36a3

• Create a new CIF interface consistent with BinaryCIF interface

  padix-key

  committed
  a15ed57

  Copy full SHA for a15ed57

• Add tests for pdbx

  padix-key

  committed
  7c96aaa

  Copy full SHA for 7c96aaa

• Refactor conversion functions

  padix-key

  committed
  01afe8e

  Copy full SHA for 01afe8e

• Replace deprecated PDBxFile

  padix-key

  committed
  b6be3cf

  Copy full SHA for b6be3cf

• Remove usage of MMTF where possible

  padix-key

  committed
  d5303a0

  Copy full SHA for d5303a0

• Remove MMTF and add BinaryCIF to tutorial

  padix-key

  committed
  fbec725

  Copy full SHA for fbec725

• Organize API reference for pdbx

  padix-key

  committed
  ee9d492

  Copy full SHA for ee9d492