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* Update setup.py - correct repo url - tensorflow as an extra requirement - add bigfish as a `find_package` Co-authored-by: Wei Ouyang <[email protected]>
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# Package meta-data. | ||
VERSION = 1.0 | ||
DESCRIPTION = 'Toolbox for cell FISH images.' | ||
DESCRIPTION = 'Toolbox for the analysis of smFISH images.' | ||
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# Package abstract dependencies | ||
REQUIRES = [ | ||
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'scikit-learn >= 0.20.2', | ||
'scikit-image >= 0.14.2', | ||
'scipy >= 1.2.0', | ||
'tensorflow >= 1.12.0, < 2.0', | ||
'matplotlib >= 3.0.2', | ||
'pandas >= 0.24.0', | ||
'numba >= 0.37.0', | ||
'umap-learn >= 0.3.9', | ||
'mrc >= 0.1.5' | ||
] | ||
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DEEPLEARNING_REQUIREMENTS = ['tensorflow >= 1.12.0, < 2.0'] | ||
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# Long description of the package | ||
with open("README.md", "r") as f: | ||
LONG_DESCRIPTION = f.read() | ||
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long_description_content_type="text/markdown", | ||
author='Arthur Imbert', | ||
author_email='[email protected]', | ||
url='https://github.com/Henley13/big-fish', | ||
url='https://github.com/fish-quant/big-fish', | ||
packages=find_packages(), | ||
license='MIT', | ||
python_requires='>=3.6.0', | ||
install_requires=REQUIRES, | ||
extras_require={ | ||
'deeplearning': DEEPLEARNING_REQUIREMENTS | ||
}, | ||
classifiers=CLASSIFIERS | ||
) | ||
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