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Smaller fixes for packaging #6

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merged 15 commits into from
May 5, 2020
Merged

Smaller fixes for packaging #6

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8630c76
Update setup.py
muellerflorian Mar 13, 2020
274ee0b
Update setup.py
muellerflorian Mar 13, 2020
eaa1dfb
Update setup.py
muellerflorian Mar 13, 2020
01f2b09
Update setup.py
muellerflorian Mar 13, 2020
c84f013
Update setup.py
muellerflorian Mar 13, 2020
8a71e2c
Update setup.py
muellerflorian Mar 13, 2020
fa98891
Update setup.py
muellerflorian Mar 13, 2020
af83079
Update setup.py
muellerflorian Mar 13, 2020
d664a32
Create _init_.py
muellerflorian Mar 16, 2020
7b93e9e
Rename _init_.py to __init__.py
oeway Mar 16, 2020
20f0140
Rename _init_.py to __init__.py
muellerflorian Mar 16, 2020
819b6c3
Merge pull request #1 from oeway/patch-1
muellerflorian Mar 16, 2020
68a3bce
Update setup.py
muellerflorian Mar 16, 2020
9c3e8bd
Fix setup.py
oeway Mar 16, 2020
f65fc78
Merge pull request #2 from oeway/patch-2
muellerflorian Mar 16, 2020
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1 change: 1 addition & 0 deletions bigfish/__init__.py
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Original file line number Diff line number Diff line change
@@ -0,0 +1 @@

11 changes: 8 additions & 3 deletions setup.py
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Expand Up @@ -10,7 +10,7 @@

# Package meta-data.
VERSION = 1.0
DESCRIPTION = 'Toolbox for cell FISH images.'
DESCRIPTION = 'Toolbox for the analysis of smFISH images.'

# Package abstract dependencies
REQUIRES = [
Expand All @@ -19,14 +19,15 @@
'scikit-learn >= 0.20.2',
'scikit-image >= 0.14.2',
'scipy >= 1.2.0',
'tensorflow >= 1.12.0, < 2.0',
'matplotlib >= 3.0.2',
'pandas >= 0.24.0',
'numba >= 0.37.0',
'umap-learn >= 0.3.9',
'mrc >= 0.1.5'
]

DEEPLEARNING_REQUIREMENTS = ['tensorflow >= 1.12.0, < 2.0']

# Long description of the package
with open("README.md", "r") as f:
LONG_DESCRIPTION = f.read()
Expand Down Expand Up @@ -56,10 +57,14 @@
long_description_content_type="text/markdown",
author='Arthur Imbert',
author_email='[email protected]',
url='https://github.com/Henley13/big-fish',
url='https://github.com/fish-quant/big-fish',
packages=find_packages(),
license='MIT',
python_requires='>=3.6.0',
install_requires=REQUIRES,
extras_require={
'deeplearning': DEEPLEARNING_REQUIREMENTS
},
classifiers=CLASSIFIERS
)