Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Allow upload of fNIRS BIDS #1864

Closed
youennmerel opened this issue Sep 19, 2023 · 0 comments · Fixed by #1865
Closed

Allow upload of fNIRS BIDS #1864

youennmerel opened this issue Sep 19, 2023 · 0 comments · Fixed by #1865
Assignees
@youennmerel
Labels
bids Bids related issues feature import

Comments

@youennmerel
Copy link
Collaborator

youennmerel commented Sep 19, 2023 •
edited
Loading

When trying to import a fNIRS BIDS in Shanoir, the import fail with the following error : "The data type folder is not recognized. Please update your BIDS archive following the rules."

This is probably because the dataset type "nirs" is not recognized in Shanoir

Data sample :
https://osf.io/juxy8
https://github.com/bids-standard/bids-examples#nirs-datasets
@youennmerel youennmerel added import feature bids Bids related issues labels Sep 19, 2023
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 19, 2023
@youennmerel
[fli-iam#fli-iam#1864] Add NIRS type BIDS
9f7cab8
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 19, 2023
@youennmerel
[fli-iam#fli-iam#1864] Add NIRS type BIDS
7268050
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 19, 2023
@youennmerel
[fli-iam#1864] Remove NIRS dataset type
4de1b45
@youennmerel youennmerel linked a pull request Sep 19, 2023 that will close this issue
[fli-iam#1864] Add NIRS type BIDS #1865
Merged
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 20, 2023
@youennmerel
[fli-iam#1864] Correct unit test
30c2d28
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 20, 2023
@youennmerel
[fli-iam#1864] Correct typo
e4b8e35
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 21, 2023
@youennmerel
[fli-iam#1864] Correct review comments
ddef761
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 21, 2023
@youennmerel
[fli-iam#1864] Correct reviews comment
23a270d
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 22, 2023
@youennmerel
[fli-iam#1864] Add NIRS manufacturer model modality
05c4af1
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 25, 2023
@youennmerel
Merge branch 'develop' into fli-iam#fli-iam#1864
abd47b1
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 25, 2023
@youennmerel
[fli-iam#1864] Correct acquisition update rights
f66e701
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 29, 2023
@youennmerel
[fli-iam#1864] Set study name in import job
5fe0db8
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Sep 29, 2023
@youennmerel
Merge branch 'fli-iam:develop' into fli-iam#fli-iam#1864
7d89316
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Oct 24, 2023
@youennmerel
[fli-iam#1864] Correct PR review
d1d6dd4
@youennmerel youennmerel self-assigned this Nov 13, 2023
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Nov 22, 2023
@youennmerel
[fli-iam#1864] remove non alphanumeric characters in BIDS labels
47052fb
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Nov 23, 2023
@youennmerel
[fli-iam#1864] Correct failing TU
b0b5e5e
youennmerel added a commit to youennmerel/shanoir-ng that referenced this issue Nov 23, 2023
@youennmerel
[fli-iam#1864] Correct acq_time parsing
435d543
michaelkain added a commit that referenced this issue Nov 24, 2023
@michaelkain
Merge pull request #1865 from youennmerel/fli-iam##1864
052cb2f 
[#1864] Add NIRS type BIDS
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@youennmerel youennmerel

Labels
bids Bids related issues feature import
Projects
None yet
Milestone
No milestone
Development

Successfully merging a pull request may close this issue.

[fli-iam#1864] Add NIRS type BIDS youennmerel/shanoir-ng
1 participant
@youennmerel