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Update TOMAS extensions for use in GCHP #251

Merged
merged 12 commits into from
Dec 6, 2023
Merged

Update TOMAS extensions for use in GCHP #251

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5dc6768
Updates to enable TOMAS to run in GCHP
BettyCroft Feb 21, 2022
c0f602c
Updates for TOMAS
BettyCroft May 23, 2022
462a696
Additional code cleaning for TOMAS in HEMCO
BettyCroft May 25, 2022
1921792
resolved 2 conflicts in hcox_tomas_jeagle_mod.F90
Aug 15, 2022
0ce984c
Merge remote-tracking branch 'origin/dev' into feature/TOMAS
Jourdan-He Sep 21, 2022
401a61e
Merge branch 'feature/TOMAS' into dev/3.6.0
msulprizio Nov 9, 2022
8a30947
Remove extra variables HCOX_TOMAS_Jeagle_Run preventing code from com…
msulprizio Nov 11, 2022
315d15e
Remove trailing whitespaces from hcox_tomas_jeagle_mod.F90
msulprizio Nov 14, 2022
104890c
Merge branch 'feature/TOMAS' into dev/3.6.0
msulprizio Nov 16, 2022
c5926a2
Merge PR #164 (branch 'feature/TOMAS') into dev/3.7.0
msulprizio Apr 5, 2023
6843c86
Merge branch 'main' (version 3.7.1) into dev/tomas
msulprizio Oct 25, 2023
9c04d3b
Rename TOMAS species to include a padding zero for bins 1-9
msulprizio Oct 30, 2023
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21 changes: 10 additions & 11 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,10 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [Unreleased 3.8.0] - TBD
### Changed
- Updated TOMAS_Jeagle sea salt extension

## [3.7.1] - 2023-10-10
### Changed
- Updated version numbers to 3.7.1
Expand Down Expand Up @@ -100,14 +104,11 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

## [3.5.2] - 2022-11-29
### Added
- Added sanitizer option for detecting memory leaks in HEMCO
standalone during build
- Added sanitizer option for detecting memory leaks in HEMCO standalone during build

### Changed
- Remove unused, commented-out code in `src/Extensions/hcox_dustdead_mod.F`
- Replaced placeholder error messages in
`src/Core/hco_config_mod.F90` with more informational messages
(often including the line of the HEMCO_Config.rc in the printout)
- Replaced placeholder error messages in `src/Core/hco_config_mod.F90` with more informational messages (often including the line of the HEMCO_Config.rc in the printout)
- Added improved documentation for time cycle flag `EFYO` in ReadTheDocs

### Fixed
Expand All @@ -121,8 +122,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Added
- Support for MAPL 2.16 (needed by GCHP and GEOS)
- Bug fix for HEMCO standalone run directory creation
- Bug fix: If HEMCO masks are specified as `lon1/lat1/lon2/lat2`,
then don't try to read from disk
- Bug fix: If HEMCO masks are specified as `lon1/lat1/lon2/lat2`, then don't try to read from disk
- Documentation from the GEOS-Chem wiki (now on ReadTheDocs)
- Badges for the ReadTheDocs front page
- Bug fix for masking issues in MPI environment (for WRF, CESM)
Expand Down Expand Up @@ -265,6 +265,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- Bug fix for distributing emissions in the vertical dimension
- New error checks in the HEMCO standalone module
- Bug fix for `ifort` compiler in soil NOx extension

### Removed
- Null string character from netCDF unit string

Expand All @@ -280,8 +281,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

## [2.1.004] - 2017-12-30
### Added
- Updates to remove possible issues and excessive print statements when
operating in GEOS environment
- Updates to remove possible issues and excessive print statements when operating in GEOS environment
- Fixed possible tracer ID mismatch in sea salt extension
- New option to normalize MEGAN LAI, HEMCO diagnostics
- Now write multiple time slices into one file
Expand Down Expand Up @@ -364,8 +364,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

## [1.1.009] - 2015-09-10
### Added
- Bug fixes to allow specifying flexible diagnostics output
frequencies.
- Bug fixes to allow specifying flexible diagnostics output frequencies.

## [1.1.008] - 2015-07-06
### Added
Expand Down
18 changes: 9 additions & 9 deletions src/Extensions/hcox_tomas_dustdead_mod.F
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Expand Up @@ -517,15 +517,15 @@ SUBROUTINE HCOX_TOMAS_DustDead_Run( ExtState, HcoState, RC )

! Get the proper species name
!%%% This is a kludge, do better later %%%
IF ( N==1 ) SpcName = 'NK1'
IF ( N==2 ) SpcName = 'NK2'
IF ( N==3 ) SpcName = 'NK3'
IF ( N==4 ) SpcName = 'NK4'
IF ( N==5 ) SpcName = 'NK5'
IF ( N==6 ) SpcName = 'NK6'
IF ( N==7 ) SpcName = 'NK7'
IF ( N==8 ) SpcName = 'NK8'
IF ( N==9 ) SpcName = 'NK9'
IF ( N==1 ) SpcName = 'NK01'
IF ( N==2 ) SpcName = 'NK02'
IF ( N==3 ) SpcName = 'NK03'
IF ( N==4 ) SpcName = 'NK04'
IF ( N==5 ) SpcName = 'NK05'
IF ( N==6 ) SpcName = 'NK06'
IF ( N==7 ) SpcName = 'NK07'
IF ( N==8 ) SpcName = 'NK08'
IF ( N==9 ) SpcName = 'NK09'
IF ( N==10 ) SpcName = 'NK10'
IF ( N==11 ) SpcName = 'NK11'
IF ( N==12 ) SpcName = 'NK12'
Expand Down
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