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[REF] Add major classes/functions to parent namespaces #600

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Nov 6, 2021
Merged

[REF] Add major classes/functions to parent namespaces #600

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18 changes: 17 additions & 1 deletion nimare/annotate/__init__.py
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Original file line number Diff line number Diff line change
@@ -1,5 +1,21 @@
"""Automated annotation tools."""

from . import cogat, gclda, lda, text, utils
from .cogat import CogAtLemmatizer, expand_counts, extract_cogat
from .gclda import GCLDAModel
from .lda import LDAModel
from .text import generate_counts

__all__ = ["cogat", "gclda", "lda", "text", "utils"]
__all__ = [
"CogAtLemmatizer",
"expand_counts",
"extract_cogat",
"GCLDAModel",
"LDAModel",
"generate_counts",
"cogat",
"gclda",
"lda",
"text",
"utils",
]
30 changes: 29 additions & 1 deletion nimare/decode/__init__.py
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Original file line number Diff line number Diff line change
@@ -1,5 +1,33 @@
"""Functional decoding tools."""

from . import continuous, discrete, encode
from .continuous import (
CorrelationDecoder,
CorrelationDistributionDecoder,
gclda_decode_map,
)
from .discrete import (
BrainMapDecoder,
NeurosynthDecoder,
ROIAssociationDecoder,
brainmap_decode,
gclda_decode_roi,
neurosynth_decode,
)
from .encode import gclda_encode

__all__ = ["continuous", "discrete", "encode"]
__all__ = [
"CorrelationDecoder",
"CorrelationDistributionDecoder",
"gclda_decode_map",
"BrainMapDecoder",
"NeurosynthDecoder",
"ROIAssociationDecoder",
"brainmap_decode",
"gclda_decode_roi",
"neurosynth_decode",
"gclda_encode",
"continuous",
"discrete",
"encode",
]
18 changes: 18 additions & 0 deletions nimare/meta/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,16 @@

from . import ibma, kernel
from .cbma import ALE, KDA, SCALE, ALESubtraction, MKDAChi2, MKDADensity, ale, mkda
from .ibma import (
DerSimonianLaird,
Fishers,
Hedges,
PermutedOLS,
SampleSizeBasedLikelihood,
Stouffers,
VarianceBasedLikelihood,
WeightedLeastSquares,
)
from .kernel import ALEKernel, KDAKernel, MKDAKernel

__all__ = [
Expand All @@ -11,6 +21,14 @@
"MKDADensity",
"MKDAChi2",
"KDA",
"DerSimonianLaird",
"Fishers",
"Hedges",
"PermutedOLS",
"SampleSizeBasedLikelihood",
"Stouffers",
"VarianceBasedLikelihood",
"WeightedLeastSquares",
"MKDAKernel",
"ALEKernel",
"KDAKernel",
Expand Down