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Add logic to skip cardannotation #1433

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Add logic to skip cardannotation

Add logic to skip cardannotation #1433

Run time

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Job Run time
Choose nextflow versions to test against depending on target branch
1s
Run pipeline with test data (24.04.2 | test | docker)
2m 50s
Run pipeline with test data (24.04.2 | test_nothing | docker)
3m 59s
Run pipeline with test data (24.04.2 | test_bakta | docker)
9m 40s
Run pipeline with test data (24.04.2 | test_prokka | docker)
8m 24s
Run pipeline with test data (24.04.2 | test_bgc_pyrodigal | docker)
22m 38s
Run pipeline with test data (24.04.2 | test_bgc_bakta | docker)
17m 31s
Run pipeline with test data (24.04.2 | test_bgc_prokka | docker)
17m 24s
Run pipeline with test data (24.04.2 | test_taxonomy_pyrodigal | docker)
24m 40s
Run pipeline with test data (24.04.2 | test_taxonomy_bakta | docker)
21m 16s
Run pipeline with test data (24.04.2 | test_taxonomy_prokka | docker)
23m 46s
Run pipeline with test data (24.04.2 | test_preannotated | docker)
11m 21s
Run pipeline with test data (24.04.2 | test_preannotated_bgc | docker)
30m 31s
Run pipeline with test data (latest-everything | test | docker)
11m 15s
Run pipeline with test data (latest-everything | test_nothing | docker)
3m 42s
Run pipeline with test data (latest-everything | test_bakta | docker)
9m 9s
Run pipeline with test data (latest-everything | test_prokka | docker)
9m 23s
Run pipeline with test data (latest-everything | test_bgc_pyrodigal | docker)
16m 27s
Run pipeline with test data (latest-everything | test_bgc_bakta | docker)
19m 0s
Run pipeline with test data (latest-everything | test_bgc_prokka | docker)
22m 2s
Run pipeline with test data (latest-everything | test_taxonomy_pyrodigal | docker)
4m 12s
Run pipeline with test data (latest-everything | test_taxonomy_bakta | docker)
21m 13s
Run pipeline with test data (latest-everything | test_taxonomy_prokka | docker)
22m 28s
Run pipeline with test data (latest-everything | test_preannotated | docker)
12m 56s
Run pipeline with test data (latest-everything | test_preannotated_bgc | docker)
32m 37s
6h 18m 25s