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fix-linting.yml
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Specify additional "genomes" of spike-in controls for downstream calculation of bisulfite conversion efficiency Fix linting from a comment #342: Issue comment #394 (comment) created by trum994
February 1, 2025 00:37 2s
February 1, 2025 00:37 2s
Important! Template update for nf-core/tools v3.1.2 Fix linting from a comment #341: Issue comment #503 (comment) created by nf-core-bot
January 27, 2025 14:48 3s
January 27, 2025 14:48 3s
Update test command in usage.md Fix linting from a comment #340: Issue comment #502 (comment) created by nf-core-bot
December 23, 2024 11:20 2s
December 23, 2024 11:20 2s
test command wrong in usage.md Fix linting from a comment #339: Issue comment #501 (comment) created by sateeshperi
December 23, 2024 11:18 3s
December 23, 2024 11:18 3s
Fix linting from a comment Fix linting from a comment #338: created by sateeshperi
December 23, 2024 11:18 2s
December 23, 2024 11:18 2s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #337: Issue comment #388 (comment) created by sateeshperi
December 18, 2024 03:37 2s
December 18, 2024 03:37 2s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #336: Issue comment #388 (comment) created by MMJBerger
December 17, 2024 15:07 3s
December 17, 2024 15:07 3s
Addition of --mergeContext for MethylDackel Fix linting from a comment #335: Issue comment #460 (comment) created by sateeshperi
December 17, 2024 07:38 2s
December 17, 2024 07:38 2s
CG CHG and CHH with --comprehensive flag using bismark workflow Fix linting from a comment #334: Issue comment #388 (comment) created by sateeshperi
December 17, 2024 07:22 2s
December 17, 2024 07:22 2s
Add SNP calling Fix linting from a comment #333: Issue comment #65 (comment) created by sateeshperi
December 17, 2024 03:59 1s
December 17, 2024 03:59 1s
Empty .bedGraph.gz and .bismark.cov.gz files Fix linting from a comment #332: Issue comment #483 (comment) created by sateeshperi
December 17, 2024 03:57 3s
December 17, 2024 03:57 3s
Bwameth vs bismark Fix linting from a comment #331: Issue comment #405 (comment) created by sateeshperi
December 17, 2024 03:45 2s
December 17, 2024 03:45 2s
Command error: ln: Sample_Name.fastq.gz: File exists Fix linting from a comment #330: Issue comment #425 (comment) created by sateeshperi
December 17, 2024 03:43 2s
December 17, 2024 03:43 2s
Error when running 2.7.0 and 2.7.1 Fix linting from a comment #329: Issue comment #482 (comment) created by sateeshperi
December 17, 2024 03:43 3s
December 17, 2024 03:43 3s
Fix linting from a comment Fix linting from a comment #328: created by sateeshperi
December 16, 2024 10:12 2s
December 16, 2024 10:12 2s
Add gemBS option Fix linting from a comment #327: Issue comment #387 (comment) created by seynard
December 16, 2024 09:27 3s
December 16, 2024 09:27 3s
Trimming question + analysis of specific regions Fix linting from a comment #326: Issue comment #87 (comment) created by ewels
December 14, 2024 11:14 2s
December 14, 2024 11:14 2s
Is the cytosine report (.CpG_report.txt.gz) analyzed from deduplicated data? Fix linting from a comment #325: Issue comment #423 (comment) created by sateeshperi
December 14, 2024 09:52 2s
December 14, 2024 09:52 2s
Command error: ln: Sample_Name.fastq.gz: File exists Fix linting from a comment #324: Issue comment #425 (comment) created by sateeshperi
December 14, 2024 09:35 2s
December 14, 2024 09:35 2s
Pipeline requires 72GB of RAM, even to test. Fix linting from a comment #323: Issue comment #408 (comment) created by sateeshperi
December 14, 2024 09:31 2s
December 14, 2024 09:31 2s
Adding --maxVariantFrac and --minOppositeDepth to MethylDackel (Bwameth option) Fix linting from a comment #322: Issue comment #404 (comment) created by sateeshperi
December 14, 2024 09:17 2s
December 14, 2024 09:17 2s
AS-XS tag missing Fix linting from a comment #321: Issue comment #397 (comment) created by sateeshperi
December 14, 2024 09:14 2s
December 14, 2024 09:14 2s
Add gemBS option Fix linting from a comment #320: Issue comment #387 (comment) created by sateeshperi
December 14, 2024 09:02 2s
December 14, 2024 09:02 2s
Add gemBS option Fix linting from a comment #319: Issue comment #387 (comment) created by seynard
December 14, 2024 08:56 2s
December 14, 2024 08:56 2s
Add gemBS option Fix linting from a comment #318: Issue comment #387 (comment) created by sateeshperi
December 14, 2024 08:46 3s
December 14, 2024 08:46 3s