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@sebepedroslab

Sebé-Pedrós Lab

Sebé-Pedrós Lab at CRG

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  1. GeneExt GeneExt Public

    Forked from zolotarovgl/GeneExt

    GeneExt - Gene extension for improved scRNA-seq data counting

    Python 13 3

  2. chromatin-evolution-analysis chromatin-evolution-analysis Public

    A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

    R 4 4

  3. Stylophora_single_cell_atlas Stylophora_single_cell_atlas Public

    Code for the analyses in the paper "A stony coral cell atlas illuminates the molecular and cellular basis of coral symbiosis, calcification, and immunity"

    R 3 2

  4. wga-pipeline wga-pipeline Public

    draft pipeline for WGA alignment

    Shell 2

  5. training-collection training-collection Public

    Forked from sib-swiss/training-collection

    Collection of bioinformatics training materials

    2 1

  6. oneliners oneliners Public

    Forked from xgrau/oneliners

    Useful bash one-liners for bioinformatics.

Repositories

Showing 10 of 11 repositories
  • early-metazoa-3D-chromatin Public

    Code to reproduce analyses in Kim et al. 2024

    sebepedroslab/early-metazoa-3D-chromatin’s past year of commit activity
    R 0 0 0 0 Updated Jan 20, 2025
  • Stylophora_single_cell_atlas Public

    Code for the analyses in the paper "A stony coral cell atlas illuminates the molecular and cellular basis of coral symbiosis, calcification, and immunity"

    sebepedroslab/Stylophora_single_cell_atlas’s past year of commit activity
    R 3 2 0 0 Updated Jan 4, 2025
  • shinyscdb Public
    sebepedroslab/shinyscdb’s past year of commit activity
    R 0 0 0 0 Updated Nov 13, 2024
  • GeneExt Public Forked from zolotarovgl/GeneExt

    GeneExt - Gene extension for improved scRNA-seq data counting

    sebepedroslab/GeneExt’s past year of commit activity
    Python 13 GPL-3.0 4 0 0 Updated May 29, 2024
  • placozoa-cell-type-evolution-code Public Forked from xgrau/placozoa-cell-type-evolution-code

    Code for our work on cell type evolution in placozoans (Najle, Grau-Bové et al., Cell 2023)

    sebepedroslab/placozoa-cell-type-evolution-code’s past year of commit activity
    0 1 0 0 Updated Jan 26, 2024
  • Xenoturbella_sc_atlas Public

    Input data and code to reproduce analyses in Robertson et al. "Single cell atlas of Xenoturbella bocki highlights the limited cell-type complexity of a non-vertebrate deuterostome lineage "

    sebepedroslab/Xenoturbella_sc_atlas’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jan 9, 2024
  • awesome-ggplot2 Public Forked from erikgahner/awesome-ggplot2

    A curated list of awesome ggplot2 tutorials, packages etc.

    sebepedroslab/awesome-ggplot2’s past year of commit activity
    0 170 0 0 Updated Aug 25, 2022
  • training-collection Public Forked from sib-swiss/training-collection

    Collection of bioinformatics training materials

    sebepedroslab/training-collection’s past year of commit activity
    2 184 0 0 Updated Aug 18, 2022
  • chromatin-evolution-analysis Public

    A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

    sebepedroslab/chromatin-evolution-analysis’s past year of commit activity
    R 4 4 0 0 Updated Jun 10, 2022
  • wga-pipeline Public

    draft pipeline for WGA alignment

    sebepedroslab/wga-pipeline’s past year of commit activity
    Shell 2 0 1 0 Updated Aug 19, 2020
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