Releases: FZJ-INM1-BDA/siibra-python
Releases · FZJ-INM1-BDA/siibra-python
v0.3a18
v0.3a17
What's Changed
- refactor: pydantic lite rewrite by @xgui3783 in #154
- feature: addition to pydantic models by @xgui3783 in #158
- bugfix: fetch map results in error by @xgui3783 in #159
- feat: extend models by @xgui3783 in #160
- add tests to all connectivity features (many are buggy) by @xgui3783 in #161
- extend pydantic model by @xgui3783 in #163
- new function to find a feature by id without the need to provide an a… by @marcenko in #165
- feat: extend models by @xgui3783 in #164
- extend region model, catch cases where mapIndex is None by @xgui3783 in #167
- feat: auto set ng volume map type by @xgui3783 in #172
- fix internal identifier to make it relevant by @xgui3783 in #171
- reduce number of features for connectivity test by @marcenko in #166
- feat: unify at_type for pydantic models by @xgui3783 in #170
- model fix: refining region internal identifier by @xgui3783 in #174
- bugfix: to_model of regions in surface based space by @xgui3783 in #175
- chore: unify at_type field name by @xgui3783 in #177
- Feat cell density to model by @marcenko in #176
- feat: extend ieeg models to be in_roi, if provided by @xgui3783 in #178
- bugfix: use xform in json as defacto xform by @xgui3783 in #179
- feat: enforce feature type in feature id by @xgui3783 in #180
- fix conn feat instance types by @xgui3783 in #181
- tmp fix: jba29 in big brain by @xgui3783 in #186
- feat: allow thresholding cont maps for spatialfeat by @xgui3783 in #184
Full Changelog: v0.3a16...v0.3a17
Contributors
marcenko and xgui3783
Assets 2
v0.3a16
Full Changelog: v0.3a15...v0.3a16
Connectivity code example
Full Changelog: v0.3a14...v0.3a15
v0.3a14
Full Changelog: v0.3a13...v0.3a14
v0.3a13
v0.3a11
Full Changelog: v0.3a10...v0.3a11
v0.3a10
Full Changelog: v0.3a9...v0.3a10
v0.3a9
Full Changelog: v0.3a8...v0.3a9
v0.3a8
- Qualifications and descriptions of feature links to brain regions, see examples/03_data_features/000_matchings.py
- Basic support for surface meshes
- remove dependency to cloud-volume in favor of the much more lightweight neuroglancer-scripts
- first implementation of EbrainsPublicDatasetConnector for querying versioned files from datasets in the new EBRAINS Knowledge Graph V3, used for new connectivity datasets (https://github.com/FZJ-INM1-BDA/siibra-python/blob/ff2048d952299b2a8594108c2318d92c0c22f6be/siibra/retrieval/repositories.py#L264)
- first implementation of EbrainsHdgConnector for getting data from the EBRAINS Human Data Gateway (https://github.com/FZJ-INM1-BDA/siibra-python/blob/ff2048d952299b2a8594108c2318d92c0c22f6be/siibra/retrieval/repositories.py#L174)
- many smaller fixes and updates