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CANOPUS prediction based on NPClassifier? #73

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titodamiani opened this issue May 11, 2022 · 2 comments
Closed

CANOPUS prediction based on NPClassifier? #73

titodamiani opened this issue May 11, 2022 · 2 comments

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@titodamiani
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Hi,
I have a quick question. Are the CANOPUS prediction based on NPClassifier available in a summary tsv file (like the canopus_formula_summary_tsv?). I cannot find it (I’m using SIRIUS 5.4.1)

Thanks,
Tito

@kaibioinfo
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Hi,
not yet, maybe we should add that. You can export them with the new export-prediction subtool, though. It should also work from the GUI. For the CLI the command is

prediction-export --output npc_summary.csv --npc

@mfleisch
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Hey Tito,
they are available since a few days in the canopus_formula_summary_tsv.
Just redownload v5.4.1-SNAPSHOT and it should be there.

Since this is a snapshot version (this means it is rebuild every time we submit a change) the version number is not increased for every little change.

Best
Markus

mfleisch pushed a commit that referenced this issue Aug 2, 2024
Resolve "Organize project space"

Closes #73

See merge request bright-giant/sirius/sirius-libs!45
mfleisch pushed a commit that referenced this issue Aug 2, 2024
…mono-repo' into 'master'

Resolve "Merge sirius-libs into sirius-frontend to create a mono repo."

Closes #300, #132, #126, #123, #128, #125, #127, #124, #122, #121, #120, #109, #115, #106, #99, #112, #111, #61, #110, #103, #108, #107, #104, #221, #102, #98, #198, #92, #94, #93, #85, #84, #87, #76, #56, #73, #32, #70, #65, #43, #63, #33, #53, #58, #59, #57, #54, #52, #41, #47, #50, #49, #48, #39, #46, #37, #38, #27, #34, #22, #31, #28, #18, #23, #21, #19, #9, #240, #280, #254, #242, #246, #238, #156, #25, #155, #189, #172, #154, #11, #6, #16, and #4

See merge request bright-giant/sirius/sirius-frontend!106
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