Release 2025.2

What's Changed

• Display LC/MS Configurations for Lipidomics and Metabolomics by @naglepuff in #1525
• Add date_last_modified and supporting changes by @JamesTessmer in #1533
• Add metadata suggestion UI by @pkalita-lbl in #1535
• Update ingester to report more events via Slack by @eecavanna in #1474
• Update API endpoint to support date_last_modified by @JamesTessmer in #1541
• Hotfix: Don't include invalid data objects in mod_zip file list by @naglepuff in #1540
• Update nmdc-schema and submission-schema each to version 11.4.0 by @eecavanna in #1544

Full Changelog: v1.3.1...v1.4.0

Release 2025.1

What's Changed

• Incorporate feedback from run-through with new developer by @eecavanna in #1438
• Guard against null funding_sources by @naglepuff in #1494
• Fix logic for Additional Resources section by @naglepuff in #1498
• Fix metap ingest by @naglepuff in #1499
• Use same object for tooltips and legend by @naglepuff in #1503
• Fix typo in kegg URL by @naglepuff in #1508
• Use environment variables to populate Data Portal banner by @naglepuff in #1510
• Add initial button for test submission by @JamesTessmer in #1495
• Bump nmdc-schema to 11.3.0 and nmdc-submission-schema to 11.3.0 by @eecavanna in #1519
• 1281 update shipping info by @marySalvi in #1506
• Format migration files by @naglepuff in #1532
• Refresh development docs by @pkalita-lbl in #1441
• update some descriptions on the UI by @mslarae13 in #1528
• update UI text by @mslarae13 in #1530

New Contributors

• @mslarae13 made their first contribution in #1528

Full Changelog: v1.2.3...v1.3.0

Release 2024.12.4

This hotfix release introduces a UI banner announcing an upcoming downtime event (scheduled for January 26-February 3).

Fixes #1521

Full Changelog: v1.2.3...v1.2.4

Release 2024.12.3

Fix #1496

Hotfix ingest and search for metaproteomic gene function annotations.

Release 2024.12.2

Fix #1497

Hotfix for study page display.

Release 2024.12.1

Hotfix for study page bugs:

• Improper use of length with a Set
• Improper handling of null values for a study's funding_sources

Fix #1493

Release 2024.12

What's Changed

• 767 add email field by @marySalvi in #1442
• Post message to Slack when ingest completes successfully by @eecavanna in #1466
• Implement API endpoint that returns TSV report about submissions that are pending review by @cristina-stonepedraza in #1443
• Add nmdc_edge as a permissible source_client value by @pkalita-lbl in #1471
• Enable gene function search on GO terms by @naglepuff in #1465
• Add ability to store Field Notes-related metadata on submissions by @pkalita-lbl in #1473
• Add additional data proxies by @naglepuff in #1472
• Model KEGG/GO mappings by @naglepuff in #1477
• Upgrade to nmdc-schema v11.2.1 by @pkalita-lbl in #1488
• Add delete submission button and overflow menu by @JamesTessmer in #1446
• Synchronize portal's navigation menu with upstream website's navigation menu by @eecavanna in #1490
• 1367 multiple env select by @marySalvi in #1372
• Allow users to submit without an email stored for their account by @marySalvi in #1487
• Allow creating a submission with string or list of strings for packageName by @pkalita-lbl in #1491
• Fix GO search bugs by @naglepuff in #1492
• Support Lipidome Results by @naglepuff in #1481

New Contributors

• @cristina-stonepedraza made their first contribution in #1443

Full Changelog: v1.1.0...v1.2.0

2024.11.1

Full Changelog: v1.1.0...v1.1.1

Hotfix to properly ingest metap gene function annotations.

Fixes #1479

Release 2024.11

What's Changed

• Update dependencies and enable sentry tracing by @naglepuff in #1420
• Update DOI award box for new use cases by @JamesTessmer in #1380
• Set profiles_sample_rate for sentry by @naglepuff in #1427
• Fix ingest post dependency upgrade by @naglepuff in #1428
• Hide banner about Berkeley Schema Roll Out downtime, and reset its content by @eecavanna in #1426
• Skip BRITE terms by @naglepuff in #1409
• Make submission portal login prompt be more prominent by @eecavanna in #1188
• Remove Berkeley update banner from data and submission portals by @naglepuff in #1421
• Add COG and PFAM facets to Data Portal by @naglepuff in #1436
• nginx payload size config and sample metadata loading indicator by @pkalita-lbl in #1445
• Use correct slot when querying gene aggregations by @naglepuff in #1433
• Bump nmdc-schema and nmdc-submission-schema to 11.1.0 by @eecavanna in #1448
• Change base url and order of string parsing by @marySalvi in #1455
• Remove has_calibration column from metab table by @naglepuff in #1454
• Properly ingest ko terms and COG pathways by @naglepuff in #1459
• Change base urls for kegg by @marySalvi in #1460
• Update base url for cog by @marySalvi in #1461

Full Changelog: v1.0.1...v1.1.0

Release 2024.10.1

Hotfix to remove site banner about Berkeley rollout downtime.

Fixes: #1424

Full Changelog: v1.0.0...v1.0.1